fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_A leptum DSM 753

Genome identifier: GCA_000154345.1

NCBI assembly name: ASM15434v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, Clostridium_A, Clostridium_A leptum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, [Clostridium] leptum

Scaffolds: 21

Genes: 3,979 Protein-coding: 3,923 RNAs: 56 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
DS480331.1 Clostridium leptum DSM 753 Scfld_02_0 genomic scaffold, whole genome shotgun sequence 6,400
DS480332.1 Clostridium leptum DSM 753 Scfld_02_1 genomic scaffold, whole genome shotgun sequence 7,141
DS480333.1 Clostridium leptum DSM 753 Scfld_02_2 genomic scaffold, whole genome shotgun sequence 19,864
DS480334.1 Clostridium leptum DSM 753 Scfld_02_3 genomic scaffold, whole genome shotgun sequence 26,694
DS480335.1 Clostridium leptum DSM 753 Scfld_02_4 genomic scaffold, whole genome shotgun sequence 34,044
DS480336.1 Clostridium leptum DSM 753 Scfld_02_5 genomic scaffold, whole genome shotgun sequence 40,142
DS480337.1 Clostridium leptum DSM 753 Scfld_02_6 genomic scaffold, whole genome shotgun sequence 12,535
DS480338.1 Clostridium leptum DSM 753 Scfld_02_7 genomic scaffold, whole genome shotgun sequence 47,797
DS480339.1 Clostridium leptum DSM 753 Scfld_02_8 genomic scaffold, whole genome shotgun sequence 27,481
DS480340.1 Clostridium leptum DSM 753 Scfld_02_9 genomic scaffold, whole genome shotgun sequence 58,025
DS480341.1 Clostridium leptum DSM 753 Scfld_02_10 genomic scaffold, whole genome shotgun sequence 90,123
DS480342.1 Clostridium leptum DSM 753 Scfld_02_11 genomic scaffold, whole genome shotgun sequence 99,119
DS480343.1 Clostridium leptum DSM 753 Scfld_02_12 genomic scaffold, whole genome shotgun sequence 168,688
DS480344.1 Clostridium leptum DSM 753 Scfld_02_13 genomic scaffold, whole genome shotgun sequence 99,329
DS480345.1 Clostridium leptum DSM 753 Scfld_02_14 genomic scaffold, whole genome shotgun sequence 266,505
DS480346.1 Clostridium leptum DSM 753 Scfld_02_15 genomic scaffold, whole genome shotgun sequence 222,869
DS480347.1 Clostridium leptum DSM 753 Scfld_02_16 genomic scaffold, whole genome shotgun sequence 452,649
DS480348.1 Clostridium leptum DSM 753 Scfld_02_17 genomic scaffold, whole genome shotgun sequence 498,680
DS480349.1 Clostridium leptum DSM 753 Scfld_02_18 genomic scaffold, whole genome shotgun sequence 564,969
DS480350.1 Clostridium leptum DSM 753 Scfld_02_19 genomic scaffold, whole genome shotgun sequence 523,705
DS480351.1 Clostridium leptum DSM 753 Scfld_02_20 genomic scaffold, whole genome shotgun sequence 3,450

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory