fast.genomicscompare 6,575 genera of bacteria & archaea

 

Scatocola faecipullorum none

Genome identifier: GCA_000436195.1

NCBI assembly name: MGS260

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, RF32, CAG-239, Scatocola, Scatocola faecipullorum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Azospirillum

Scaffolds: 83

Genes: 1,812 Protein-coding: 1,762 RNAs: 50 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FR884865.1 Azospirillum sp. CAG:260 genomic scaffold, scf2, whole genome shotgun sequence 841
FR884866.1 Azospirillum sp. CAG:260 genomic scaffold, scf8, whole genome shotgun sequence 21,633
FR884867.1 Azospirillum sp. CAG:260 genomic scaffold, scf1, whole genome shotgun sequence 9,934
FR884868.1 Azospirillum sp. CAG:260 genomic scaffold, scf7, whole genome shotgun sequence 7,581
FR884869.1 Azospirillum sp. CAG:260 genomic scaffold, scf16, whole genome shotgun sequence 1,615
FR884870.1 Azospirillum sp. CAG:260 genomic scaffold, scf15, whole genome shotgun sequence 5,149
FR884871.1 Azospirillum sp. CAG:260 genomic scaffold, scf13, whole genome shotgun sequence 5,821
FR884872.1 Azospirillum sp. CAG:260 genomic scaffold, scf12, whole genome shotgun sequence 12,173
FR884873.1 Azospirillum sp. CAG:260 genomic scaffold, scf20, whole genome shotgun sequence 4,960
FR884874.1 Azospirillum sp. CAG:260 genomic scaffold, scf19, whole genome shotgun sequence 14,551
FR884875.1 Azospirillum sp. CAG:260 genomic scaffold, scf17, whole genome shotgun sequence 22,875
FR884876.1 Azospirillum sp. CAG:260 genomic scaffold, scf18, whole genome shotgun sequence 14,111
FR884877.1 Azospirillum sp. CAG:260 genomic scaffold, scf25, whole genome shotgun sequence 9,985
FR884878.1 Azospirillum sp. CAG:260 genomic scaffold, scf24, whole genome shotgun sequence 11,746
FR884879.1 Azospirillum sp. CAG:260 genomic scaffold, scf23, whole genome shotgun sequence 27,294
FR884880.1 Azospirillum sp. CAG:260 genomic scaffold, scf34, whole genome shotgun sequence 500
FR884881.1 Azospirillum sp. CAG:260 genomic scaffold, scf27, whole genome shotgun sequence 60,568
FR884882.1 Azospirillum sp. CAG:260 genomic scaffold, scf37, whole genome shotgun sequence 6,301
FR884883.1 Azospirillum sp. CAG:260 genomic scaffold, scf33, whole genome shotgun sequence 21,599
FR884884.1 Azospirillum sp. CAG:260 genomic scaffold, scf48, whole genome shotgun sequence 3,703
FR884885.1 Azospirillum sp. CAG:260 genomic scaffold, scf45, whole genome shotgun sequence 18,606
FR884886.1 Azospirillum sp. CAG:260 genomic scaffold, scf36, whole genome shotgun sequence 40,181
FR884887.1 Azospirillum sp. CAG:260 genomic scaffold, scf28, whole genome shotgun sequence 58,914
FR884888.1 Azospirillum sp. CAG:260 genomic scaffold, scf50, whole genome shotgun sequence 605
FR884889.1 Azospirillum sp. CAG:260 genomic scaffold, scf51, whole genome shotgun sequence 10,195
FR884890.1 Azospirillum sp. CAG:260 genomic scaffold, scf52, whole genome shotgun sequence 2,311
FR884891.1 Azospirillum sp. CAG:260 genomic scaffold, scf57, whole genome shotgun sequence 12,077
FR884892.1 Azospirillum sp. CAG:260 genomic scaffold, scf63, whole genome shotgun sequence 2,858
FR884893.1 Azospirillum sp. CAG:260 genomic scaffold, scf49, whole genome shotgun sequence 47,267
FR884894.1 Azospirillum sp. CAG:260 genomic scaffold, scf61, whole genome shotgun sequence 60,130
FR884895.1 Azospirillum sp. CAG:260 genomic scaffold, scf66, whole genome shotgun sequence 14,018
FR884896.1 Azospirillum sp. CAG:260 genomic scaffold, scf64, whole genome shotgun sequence 18,095
FR884897.1 Azospirillum sp. CAG:260 genomic scaffold, scf74, whole genome shotgun sequence 2,359
FR884898.1 Azospirillum sp. CAG:260 genomic scaffold, scf58, whole genome shotgun sequence 51,485
FR884899.1 Azospirillum sp. CAG:260 genomic scaffold, scf78, whole genome shotgun sequence 2,894
FR884900.1 Azospirillum sp. CAG:260 genomic scaffold, scf67, whole genome shotgun sequence 66,041
FR884901.1 Azospirillum sp. CAG:260 genomic scaffold, scf70, whole genome shotgun sequence 59,317
FR884902.1 Azospirillum sp. CAG:260 genomic scaffold, scf81, whole genome shotgun sequence 23,947
FR884903.1 Azospirillum sp. CAG:260 genomic scaffold, scf80, whole genome shotgun sequence 6,832
FR884904.1 Azospirillum sp. CAG:260 genomic scaffold, scf86, whole genome shotgun sequence 5,039
FR884905.1 Azospirillum sp. CAG:260 genomic scaffold, scf89, whole genome shotgun sequence 1,447
FR884906.1 Azospirillum sp. CAG:260 genomic scaffold, scf88, whole genome shotgun sequence 6,022
FR884907.1 Azospirillum sp. CAG:260 genomic scaffold, scf75, whole genome shotgun sequence 74,437
FR884908.1 Azospirillum sp. CAG:260 genomic scaffold, scf90, whole genome shotgun sequence 8,172
FR884909.1 Azospirillum sp. CAG:260 genomic scaffold, scf91, whole genome shotgun sequence 8,130
FR884910.1 Azospirillum sp. CAG:260 genomic scaffold, scf79, whole genome shotgun sequence 37,967
FR884911.1 Azospirillum sp. CAG:260 genomic scaffold, scf103, whole genome shotgun sequence 11,133
FR884912.1 Azospirillum sp. CAG:260 genomic scaffold, scf104, whole genome shotgun sequence 1,013
FR884913.1 Azospirillum sp. CAG:260 genomic scaffold, scf105, whole genome shotgun sequence 962
FR884914.1 Azospirillum sp. CAG:260 genomic scaffold, scf98, whole genome shotgun sequence 22,648
FR884915.1 Azospirillum sp. CAG:260 genomic scaffold, scf93, whole genome shotgun sequence 35,097
FR884916.1 Azospirillum sp. CAG:260 genomic scaffold, scf109, whole genome shotgun sequence 57,367
FR884917.1 Azospirillum sp. CAG:260 genomic scaffold, scf111, whole genome shotgun sequence 1,882
FR884918.1 Azospirillum sp. CAG:260 genomic scaffold, scf118, whole genome shotgun sequence 10,937
FR884919.1 Azospirillum sp. CAG:260 genomic scaffold, scf120, whole genome shotgun sequence 37,600
FR884920.1 Azospirillum sp. CAG:260 genomic scaffold, scf122, whole genome shotgun sequence 1,859
FR884921.1 Azospirillum sp. CAG:260 genomic scaffold, scf119, whole genome shotgun sequence 3,650
FR884922.1 Azospirillum sp. CAG:260 genomic scaffold, scf125, whole genome shotgun sequence 1,362
FR884923.1 Azospirillum sp. CAG:260 genomic scaffold, scf130, whole genome shotgun sequence 3,278
FR884924.1 Azospirillum sp. CAG:260 genomic scaffold, scf124, whole genome shotgun sequence 14,649
FR884925.1 Azospirillum sp. CAG:260 genomic scaffold, scf140, whole genome shotgun sequence 1,323
FR884926.1 Azospirillum sp. CAG:260 genomic scaffold, scf142, whole genome shotgun sequence 1,100
FR884927.1 Azospirillum sp. CAG:260 genomic scaffold, scf141, whole genome shotgun sequence 4,646
FR884928.1 Azospirillum sp. CAG:260 genomic scaffold, scf95, whole genome shotgun sequence 79,403
FR884929.1 Azospirillum sp. CAG:260 genomic scaffold, scf168, whole genome shotgun sequence 35,439
FR884930.1 Azospirillum sp. CAG:260 genomic scaffold, scf172, whole genome shotgun sequence 518
FR884931.1 Azospirillum sp. CAG:260 genomic scaffold, scf173, whole genome shotgun sequence 984
FR884932.1 Azospirillum sp. CAG:260 genomic scaffold, scf180, whole genome shotgun sequence 7,966
FR884933.1 Azospirillum sp. CAG:260 genomic scaffold, scf133, whole genome shotgun sequence 48,938
FR884934.1 Azospirillum sp. CAG:260 genomic scaffold, scf185, whole genome shotgun sequence 1,170
FR884935.1 Azospirillum sp. CAG:260 genomic scaffold, scf154, whole genome shotgun sequence 67,056
FR884936.1 Azospirillum sp. CAG:260 genomic scaffold, scf156, whole genome shotgun sequence 43,301
FR884937.1 Azospirillum sp. CAG:260 genomic scaffold, scf187, whole genome shotgun sequence 4,078
FR884938.1 Azospirillum sp. CAG:260 genomic scaffold, scf196, whole genome shotgun sequence 20,854
FR884939.1 Azospirillum sp. CAG:260 genomic scaffold, scf207, whole genome shotgun sequence 1,055
FR884940.1 Azospirillum sp. CAG:260 genomic scaffold, scf195, whole genome shotgun sequence 38,020
FR884941.1 Azospirillum sp. CAG:260 genomic scaffold, scf188, whole genome shotgun sequence 43,627
FR884942.1 Azospirillum sp. CAG:260 genomic scaffold, scf213, whole genome shotgun sequence 84,075
FR884943.1 Azospirillum sp. CAG:260 genomic scaffold, scf229, whole genome shotgun sequence 9,168
FR884944.1 Azospirillum sp. CAG:260 genomic scaffold, scf204, whole genome shotgun sequence 74,135
FR884945.1 Azospirillum sp. CAG:260 genomic scaffold, scf249, whole genome shotgun sequence 13,619
FR884946.1 Azospirillum sp. CAG:260 genomic scaffold, scf221, whole genome shotgun sequence 64,031
FR884947.1 Azospirillum sp. CAG:260 genomic scaffold, scf233, whole genome shotgun sequence 60,362

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory