fast.genomicscompare 6,575 genera of bacteria & archaea

 

Planktomarina temperata RCA23

Genome identifier: GCA_000738435.1

NCBI assembly name: ASM73843v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Planktomarina, Planktomarina temperata

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Planktomarina, Planktomarina temperata

Scaffolds: 1

Genes: 3,092 Protein-coding: 3,033 RNAs: 47 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CP003984.1 Planktomarina temperata RCA23, complete genome 3,288,122

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory