fast.genomicscompare 6,575 genera of bacteria & archaea

 

TWA4 sp000875945 TWA4

Genome identifier: GCA_000875945.1

NCBI assembly name: TWA4_1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, TWA4, TWA4 sp000875945

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 46

Genes: 2,972 Protein-coding: 2,919 RNAs: 53 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JPZU01000001.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00001, whole genome shotgun sequence 3,119,729
JPZU01000002.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00002, whole genome shotgun sequence 13,093
JPZU01000003.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00003, whole genome shotgun sequence 12,019
JPZU01000004.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00004, whole genome shotgun sequence 5,651
JPZU01000005.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00006, whole genome shotgun sequence 2,828
JPZU01000006.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00007, whole genome shotgun sequence 2,095
JPZU01000007.1 Lachnospiraceae bacterium TWA4 TWA4_scaffold00008, whole genome shotgun sequence 1,999
JPZU01000008.1 Lachnospiraceae bacterium TWA4 TWA4_contig00290, whole genome shotgun sequence 1,956
JPZU01000009.1 Lachnospiraceae bacterium TWA4 TWA4_contig00291, whole genome shotgun sequence 1,882
JPZU01000010.1 Lachnospiraceae bacterium TWA4 TWA4_contig00292, whole genome shotgun sequence 1,873
JPZU01000011.1 Lachnospiraceae bacterium TWA4 TWA4_contig00293, whole genome shotgun sequence 1,802
JPZU01000012.1 Lachnospiraceae bacterium TWA4 TWA4_contig00294, whole genome shotgun sequence 1,767
JPZU01000013.1 Lachnospiraceae bacterium TWA4 TWA4_contig00295, whole genome shotgun sequence 1,738
JPZU01000014.1 Lachnospiraceae bacterium TWA4 TWA4_contig00296, whole genome shotgun sequence 1,735
JPZU01000015.1 Lachnospiraceae bacterium TWA4 TWA4_contig00297, whole genome shotgun sequence 1,731
JPZU01000016.1 Lachnospiraceae bacterium TWA4 TWA4_contig00298, whole genome shotgun sequence 1,690
JPZU01000017.1 Lachnospiraceae bacterium TWA4 TWA4_contig00299, whole genome shotgun sequence 1,670
JPZU01000018.1 Lachnospiraceae bacterium TWA4 TWA4_contig00300, whole genome shotgun sequence 1,659
JPZU01000019.1 Lachnospiraceae bacterium TWA4 TWA4_contig00301, whole genome shotgun sequence 1,634
JPZU01000020.1 Lachnospiraceae bacterium TWA4 TWA4_contig00302, whole genome shotgun sequence 1,568
JPZU01000021.1 Lachnospiraceae bacterium TWA4 TWA4_contig00303, whole genome shotgun sequence 1,463
JPZU01000022.1 Lachnospiraceae bacterium TWA4 TWA4_contig00304, whole genome shotgun sequence 1,433
JPZU01000023.1 Lachnospiraceae bacterium TWA4 TWA4_contig00305, whole genome shotgun sequence 1,428
JPZU01000024.1 Lachnospiraceae bacterium TWA4 TWA4_contig00306, whole genome shotgun sequence 1,343
JPZU01000025.1 Lachnospiraceae bacterium TWA4 TWA4_contig00307, whole genome shotgun sequence 1,254
JPZU01000026.1 Lachnospiraceae bacterium TWA4 TWA4_contig00308, whole genome shotgun sequence 1,072
JPZU01000027.1 Lachnospiraceae bacterium TWA4 TWA4_contig00309, whole genome shotgun sequence 993
JPZU01000028.1 Lachnospiraceae bacterium TWA4 TWA4_contig00310, whole genome shotgun sequence 941
JPZU01000029.1 Lachnospiraceae bacterium TWA4 TWA4_contig00311, whole genome shotgun sequence 918
JPZU01000030.1 Lachnospiraceae bacterium TWA4 TWA4_contig00312, whole genome shotgun sequence 891
JPZU01000031.1 Lachnospiraceae bacterium TWA4 TWA4_contig00313, whole genome shotgun sequence 747
JPZU01000032.1 Lachnospiraceae bacterium TWA4 TWA4_contig00314, whole genome shotgun sequence 743
JPZU01000033.1 Lachnospiraceae bacterium TWA4 TWA4_contig00315, whole genome shotgun sequence 724
JPZU01000034.1 Lachnospiraceae bacterium TWA4 TWA4_contig00316, whole genome shotgun sequence 672
JPZU01000035.1 Lachnospiraceae bacterium TWA4 TWA4_contig00317, whole genome shotgun sequence 651
JPZU01000036.1 Lachnospiraceae bacterium TWA4 TWA4_contig00318, whole genome shotgun sequence 640
JPZU01000037.1 Lachnospiraceae bacterium TWA4 TWA4_contig00319, whole genome shotgun sequence 618
JPZU01000038.1 Lachnospiraceae bacterium TWA4 TWA4_contig00320, whole genome shotgun sequence 603
JPZU01000039.1 Lachnospiraceae bacterium TWA4 TWA4_contig00321, whole genome shotgun sequence 586
JPZU01000040.1 Lachnospiraceae bacterium TWA4 TWA4_contig00322, whole genome shotgun sequence 575
JPZU01000041.1 Lachnospiraceae bacterium TWA4 TWA4_contig00323, whole genome shotgun sequence 560
JPZU01000042.1 Lachnospiraceae bacterium TWA4 TWA4_contig00324, whole genome shotgun sequence 558
JPZU01000043.1 Lachnospiraceae bacterium TWA4 TWA4_contig00325, whole genome shotgun sequence 551
JPZU01000044.1 Lachnospiraceae bacterium TWA4 TWA4_contig00326, whole genome shotgun sequence 527
JPZU01000045.1 Lachnospiraceae bacterium TWA4 TWA4_contig00327, whole genome shotgun sequence 508
JPZU01000046.1 Lachnospiraceae bacterium TWA4 TWA4_contig00328, whole genome shotgun sequence 504

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory