fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caedimonas varicaedens none

Genome identifier: GCA_001192655.1

NCBI assembly name: ASM119265v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caedimonadales, Caedimonadaceae, Caedimonas, Caedimonas varicaedens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Holosporales, Caedimonadaceae, Caedimonas, Caedimonas varicaedens

Scaffolds: 142

Genes: 1,771 Protein-coding: 1,726 RNAs: 45 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
BBVC01000001.1 Caedibacter varicaedens DNA, contig: Cva_contig000001, whole genome shotgun sequence 10,899
BBVC01000002.1 Caedibacter varicaedens DNA, contig: Cva_contig000002, whole genome shotgun sequence 39,549
BBVC01000003.1 Caedibacter varicaedens DNA, contig: Cva_contig000003, whole genome shotgun sequence 19,975
BBVC01000004.1 Caedibacter varicaedens DNA, contig: Cva_contig000004, whole genome shotgun sequence 20,160
BBVC01000005.1 Caedibacter varicaedens DNA, contig: Cva_contig000005, whole genome shotgun sequence 14,325
BBVC01000006.1 Caedibacter varicaedens DNA, contig: Cva_contig000006, whole genome shotgun sequence 14,961
BBVC01000007.1 Caedibacter varicaedens DNA, contig: Cva_contig000007, whole genome shotgun sequence 57,769
BBVC01000008.1 Caedibacter varicaedens DNA, contig: Cva_contig000008, whole genome shotgun sequence 23,978
BBVC01000009.1 Caedibacter varicaedens DNA, contig: Cva_contig000009, whole genome shotgun sequence 6,150
BBVC01000010.1 Caedibacter varicaedens DNA, contig: Cva_contig000010, whole genome shotgun sequence 13,049
BBVC01000011.1 Caedibacter varicaedens DNA, contig: Cva_contig000011, whole genome shotgun sequence 27,829
BBVC01000012.1 Caedibacter varicaedens DNA, contig: Cva_contig000012, whole genome shotgun sequence 18,450
BBVC01000013.1 Caedibacter varicaedens DNA, contig: Cva_contig000013, whole genome shotgun sequence 25,440
BBVC01000014.1 Caedibacter varicaedens DNA, contig: Cva_contig000014, whole genome shotgun sequence 36,188
BBVC01000015.1 Caedibacter varicaedens DNA, contig: Cva_contig000015, whole genome shotgun sequence 24,481
BBVC01000016.1 Caedibacter varicaedens DNA, contig: Cva_contig000016, whole genome shotgun sequence 47,148
BBVC01000017.1 Caedibacter varicaedens DNA, contig: Cva_contig000017, whole genome shotgun sequence 12,359
BBVC01000018.1 Caedibacter varicaedens DNA, contig: Cva_contig000018, whole genome shotgun sequence 13,731
BBVC01000019.1 Caedibacter varicaedens DNA, contig: Cva_contig000019, whole genome shotgun sequence 53,002
BBVC01000020.1 Caedibacter varicaedens DNA, contig: Cva_contig000020, whole genome shotgun sequence 82,203
BBVC01000021.1 Caedibacter varicaedens DNA, contig: Cva_contig000021, whole genome shotgun sequence 30,882
BBVC01000022.1 Caedibacter varicaedens DNA, contig: Cva_contig000022, whole genome shotgun sequence 43,140
BBVC01000023.1 Caedibacter varicaedens DNA, contig: Cva_contig000023, whole genome shotgun sequence 59,216
BBVC01000024.1 Caedibacter varicaedens DNA, contig: Cva_contig000024, whole genome shotgun sequence 18,908
BBVC01000025.1 Caedibacter varicaedens DNA, contig: Cva_contig000025, whole genome shotgun sequence 21,470
BBVC01000026.1 Caedibacter varicaedens DNA, contig: Cva_contig000026, whole genome shotgun sequence 5,936
BBVC01000027.1 Caedibacter varicaedens DNA, contig: Cva_contig000027, whole genome shotgun sequence 12,442
BBVC01000028.1 Caedibacter varicaedens DNA, contig: Cva_contig000028, whole genome shotgun sequence 4,999
BBVC01000029.1 Caedibacter varicaedens DNA, contig: Cva_contig000029, whole genome shotgun sequence 10,344
BBVC01000030.1 Caedibacter varicaedens DNA, contig: Cva_contig000030, whole genome shotgun sequence 4,885
BBVC01000031.1 Caedibacter varicaedens DNA, contig: Cva_contig000031, whole genome shotgun sequence 11,884
BBVC01000032.1 Caedibacter varicaedens DNA, contig: Cva_contig000032, whole genome shotgun sequence 2,687
BBVC01000033.1 Caedibacter varicaedens DNA, contig: Cva_contig000033, whole genome shotgun sequence 7,320
BBVC01000034.1 Caedibacter varicaedens DNA, contig: Cva_contig000034, whole genome shotgun sequence 3,729
BBVC01000035.1 Caedibacter varicaedens DNA, contig: Cva_contig000035, whole genome shotgun sequence 4,705
BBVC01000036.1 Caedibacter varicaedens DNA, contig: Cva_contig000036, whole genome shotgun sequence 17,531
BBVC01000037.1 Caedibacter varicaedens DNA, contig: Cva_contig000037, whole genome shotgun sequence 24,667
BBVC01000038.1 Caedibacter varicaedens DNA, contig: Cva_contig000038, whole genome shotgun sequence 7,295
BBVC01000039.1 Caedibacter varicaedens DNA, contig: Cva_contig000039, whole genome shotgun sequence 5,409
BBVC01000040.1 Caedibacter varicaedens DNA, contig: Cva_contig000040, whole genome shotgun sequence 11,756
BBVC01000041.1 Caedibacter varicaedens DNA, contig: Cva_contig000041, whole genome shotgun sequence 10,179
BBVC01000042.1 Caedibacter varicaedens DNA, contig: Cva_contig000042, whole genome shotgun sequence 20,586
BBVC01000043.1 Caedibacter varicaedens DNA, contig: Cva_contig000043, whole genome shotgun sequence 4,557
BBVC01000044.1 Caedibacter varicaedens DNA, contig: Cva_contig000044, whole genome shotgun sequence 4,904
BBVC01000045.1 Caedibacter varicaedens DNA, contig: Cva_contig000045, whole genome shotgun sequence 9,435
BBVC01000046.1 Caedibacter varicaedens DNA, contig: Cva_contig000046, whole genome shotgun sequence 2,366
BBVC01000047.1 Caedibacter varicaedens DNA, contig: Cva_contig000047, whole genome shotgun sequence 5,318
BBVC01000048.1 Caedibacter varicaedens DNA, contig: Cva_contig000048, whole genome shotgun sequence 5,844
BBVC01000049.1 Caedibacter varicaedens DNA, contig: Cva_contig000049, whole genome shotgun sequence 2,720
BBVC01000050.1 Caedibacter varicaedens DNA, contig: Cva_contig000050, whole genome shotgun sequence 6,925
BBVC01000051.1 Caedibacter varicaedens DNA, contig: Cva_contig000051, whole genome shotgun sequence 3,717
BBVC01000052.1 Caedibacter varicaedens DNA, contig: Cva_contig000052, whole genome shotgun sequence 8,096
BBVC01000053.1 Caedibacter varicaedens DNA, contig: Cva_contig000053, whole genome shotgun sequence 9,649
BBVC01000054.1 Caedibacter varicaedens DNA, contig: Cva_contig000054, whole genome shotgun sequence 2,786
BBVC01000055.1 Caedibacter varicaedens DNA, contig: Cva_contig000055, whole genome shotgun sequence 14,169
BBVC01000056.1 Caedibacter varicaedens DNA, contig: Cva_contig000056, whole genome shotgun sequence 8,213
BBVC01000057.1 Caedibacter varicaedens DNA, contig: Cva_contig000057, whole genome shotgun sequence 3,762
BBVC01000058.1 Caedibacter varicaedens DNA, contig: Cva_contig000058, whole genome shotgun sequence 17,285
BBVC01000059.1 Caedibacter varicaedens DNA, contig: Cva_contig000059, whole genome shotgun sequence 6,987
BBVC01000060.1 Caedibacter varicaedens DNA, contig: Cva_contig000060, whole genome shotgun sequence 16,937
BBVC01000061.1 Caedibacter varicaedens DNA, contig: Cva_contig000061, whole genome shotgun sequence 18,125
BBVC01000062.1 Caedibacter varicaedens DNA, contig: Cva_contig000062, whole genome shotgun sequence 7,677
BBVC01000063.1 Caedibacter varicaedens DNA, contig: Cva_contig000063, whole genome shotgun sequence 22,120
BBVC01000064.1 Caedibacter varicaedens DNA, contig: Cva_contig000064, whole genome shotgun sequence 12,094
BBVC01000065.1 Caedibacter varicaedens DNA, contig: Cva_contig000065, whole genome shotgun sequence 16,123
BBVC01000066.1 Caedibacter varicaedens DNA, contig: Cva_contig000066, whole genome shotgun sequence 11,853
BBVC01000067.1 Caedibacter varicaedens DNA, contig: Cva_contig000067, whole genome shotgun sequence 29,814
BBVC01000068.1 Caedibacter varicaedens DNA, contig: Cva_contig000068, whole genome shotgun sequence 5,986
BBVC01000069.1 Caedibacter varicaedens DNA, contig: Cva_contig000069, whole genome shotgun sequence 5,998
BBVC01000070.1 Caedibacter varicaedens DNA, contig: Cva_contig000070, whole genome shotgun sequence 12,591
BBVC01000071.1 Caedibacter varicaedens DNA, contig: Cva_contig000071, whole genome shotgun sequence 24,140
BBVC01000072.1 Caedibacter varicaedens DNA, contig: Cva_contig000072, whole genome shotgun sequence 7,878
BBVC01000073.1 Caedibacter varicaedens DNA, contig: Cva_contig000073, whole genome shotgun sequence 4,978
BBVC01000074.1 Caedibacter varicaedens DNA, contig: Cva_contig000074, whole genome shotgun sequence 35,766
BBVC01000075.1 Caedibacter varicaedens DNA, contig: Cva_contig000075, whole genome shotgun sequence 5,431
BBVC01000076.1 Caedibacter varicaedens DNA, contig: Cva_contig000076, whole genome shotgun sequence 9,869
BBVC01000077.1 Caedibacter varicaedens DNA, contig: Cva_contig000077, whole genome shotgun sequence 6,164
BBVC01000078.1 Caedibacter varicaedens DNA, contig: Cva_contig000078, whole genome shotgun sequence 2,840
BBVC01000079.1 Caedibacter varicaedens DNA, contig: Cva_contig000079, whole genome shotgun sequence 22,997
BBVC01000080.1 Caedibacter varicaedens DNA, contig: Cva_contig000080, whole genome shotgun sequence 10,290
BBVC01000081.1 Caedibacter varicaedens DNA, contig: Cva_contig000081, whole genome shotgun sequence 4,370
BBVC01000082.1 Caedibacter varicaedens DNA, contig: Cva_contig000082, whole genome shotgun sequence 4,658
BBVC01000083.1 Caedibacter varicaedens DNA, contig: Cva_contig000083, whole genome shotgun sequence 12,678
BBVC01000084.1 Caedibacter varicaedens DNA, contig: Cva_contig000084, whole genome shotgun sequence 7,666
BBVC01000085.1 Caedibacter varicaedens DNA, contig: Cva_contig000085, whole genome shotgun sequence 6,596
BBVC01000086.1 Caedibacter varicaedens DNA, contig: Cva_contig000086, whole genome shotgun sequence 4,319
BBVC01000087.1 Caedibacter varicaedens DNA, contig: Cva_contig000087, whole genome shotgun sequence 4,387
BBVC01000088.1 Caedibacter varicaedens DNA, contig: Cva_contig000088, whole genome shotgun sequence 3,576
BBVC01000089.1 Caedibacter varicaedens DNA, contig: Cva_contig000089, whole genome shotgun sequence 5,418
BBVC01000090.1 Caedibacter varicaedens DNA, contig: Cva_contig000090, whole genome shotgun sequence 8,619
BBVC01000091.1 Caedibacter varicaedens DNA, contig: Cva_contig000091, whole genome shotgun sequence 11,114
BBVC01000092.1 Caedibacter varicaedens DNA, contig: Cva_contig000092, whole genome shotgun sequence 23,520
BBVC01000093.1 Caedibacter varicaedens DNA, contig: Cva_contig000093, whole genome shotgun sequence 2,584
BBVC01000094.1 Caedibacter varicaedens DNA, contig: Cva_contig000094, whole genome shotgun sequence 3,702
BBVC01000095.1 Caedibacter varicaedens DNA, contig: Cva_contig000095, whole genome shotgun sequence 11,177
BBVC01000096.1 Caedibacter varicaedens DNA, contig: Cva_contig000096, whole genome shotgun sequence 8,109
BBVC01000097.1 Caedibacter varicaedens DNA, contig: Cva_contig000097, whole genome shotgun sequence 20,484
BBVC01000098.1 Caedibacter varicaedens DNA, contig: Cva_contig000098, whole genome shotgun sequence 14,326
BBVC01000099.1 Caedibacter varicaedens DNA, contig: Cva_contig000099, whole genome shotgun sequence 32,912
BBVC01000100.1 Caedibacter varicaedens DNA, contig: Cva_contig000100, whole genome shotgun sequence 3,049
BBVC01000101.1 Caedibacter varicaedens DNA, contig: Cva_contig000101, whole genome shotgun sequence 19,328
BBVC01000102.1 Caedibacter varicaedens DNA, contig: Cva_contig000102, whole genome shotgun sequence 11,798
BBVC01000103.1 Caedibacter varicaedens DNA, contig: Cva_contig000103, whole genome shotgun sequence 10,431
BBVC01000104.1 Caedibacter varicaedens DNA, contig: Cva_contig000104, whole genome shotgun sequence 8,203
BBVC01000105.1 Caedibacter varicaedens DNA, contig: Cva_contig000105, whole genome shotgun sequence 2,565
BBVC01000106.1 Caedibacter varicaedens DNA, contig: Cva_contig000106, whole genome shotgun sequence 2,686
BBVC01000107.1 Caedibacter varicaedens DNA, contig: Cva_contig000107, whole genome shotgun sequence 5,401
BBVC01000108.1 Caedibacter varicaedens DNA, contig: Cva_contig000108, whole genome shotgun sequence 1,828
BBVC01000109.1 Caedibacter varicaedens DNA, contig: Cva_contig000109, whole genome shotgun sequence 13,200
BBVC01000110.1 Caedibacter varicaedens DNA, contig: Cva_contig000110, whole genome shotgun sequence 5,816
BBVC01000111.1 Caedibacter varicaedens DNA, contig: Cva_contig000111, whole genome shotgun sequence 8,524
BBVC01000112.1 Caedibacter varicaedens DNA, contig: Cva_contig000112, whole genome shotgun sequence 3,034
BBVC01000113.1 Caedibacter varicaedens DNA, contig: Cva_contig000113, whole genome shotgun sequence 2,695
BBVC01000114.1 Caedibacter varicaedens DNA, contig: Cva_contig000114, whole genome shotgun sequence 9,287
BBVC01000115.1 Caedibacter varicaedens DNA, contig: Cva_contig000115, whole genome shotgun sequence 15,367
BBVC01000116.1 Caedibacter varicaedens DNA, contig: Cva_contig000116, whole genome shotgun sequence 6,289
BBVC01000117.1 Caedibacter varicaedens DNA, contig: Cva_contig000117, whole genome shotgun sequence 4,727
BBVC01000118.1 Caedibacter varicaedens DNA, contig: Cva_contig000118, whole genome shotgun sequence 2,444
BBVC01000119.1 Caedibacter varicaedens DNA, contig: Cva_contig000119, whole genome shotgun sequence 5,932
BBVC01000120.1 Caedibacter varicaedens DNA, contig: Cva_contig000120, whole genome shotgun sequence 6,510
BBVC01000121.1 Caedibacter varicaedens DNA, contig: Cva_contig000121, whole genome shotgun sequence 3,885
BBVC01000122.1 Caedibacter varicaedens DNA, contig: Cva_contig000122, whole genome shotgun sequence 2,928
BBVC01000123.1 Caedibacter varicaedens DNA, contig: Cva_contig000123, whole genome shotgun sequence 2,740
BBVC01000124.1 Caedibacter varicaedens DNA, contig: Cva_contig000124, whole genome shotgun sequence 2,612
BBVC01000125.1 Caedibacter varicaedens DNA, contig: Cva_contig000125, whole genome shotgun sequence 2,190
BBVC01000126.1 Caedibacter varicaedens DNA, contig: Cva_contig000126, whole genome shotgun sequence 2,074
BBVC01000127.1 Caedibacter varicaedens DNA, contig: Cva_contig000127, whole genome shotgun sequence 1,663
BBVC01000128.1 Caedibacter varicaedens DNA, contig: Cva_contig000128, whole genome shotgun sequence 1,543
BBVC01000129.1 Caedibacter varicaedens DNA, contig: Cva_contig000129, whole genome shotgun sequence 1,407
BBVC01000130.1 Caedibacter varicaedens DNA, contig: Cva_contig000130, whole genome shotgun sequence 1,344
BBVC01000131.1 Caedibacter varicaedens DNA, contig: Cva_contig000131, whole genome shotgun sequence 1,225
BBVC01000132.1 Caedibacter varicaedens DNA, contig: Cva_contig000132, whole genome shotgun sequence 1,214
BBVC01000133.1 Caedibacter varicaedens DNA, contig: Cva_contig000133, whole genome shotgun sequence 1,215
BBVC01000134.1 Caedibacter varicaedens DNA, contig: Cva_contig000134, whole genome shotgun sequence 1,202
BBVC01000135.1 Caedibacter varicaedens DNA, contig: Cva_contig000135, whole genome shotgun sequence 1,178
BBVC01000136.1 Caedibacter varicaedens DNA, contig: Cva_contig000136, whole genome shotgun sequence 1,096
BBVC01000137.1 Caedibacter varicaedens DNA, contig: Cva_contig000137, whole genome shotgun sequence 1,021
BBVC01000138.1 Caedibacter varicaedens DNA, contig: Cva_contig000138, whole genome shotgun sequence 775
BBVC01000139.1 Caedibacter varicaedens DNA, contig: Cva_contig000139, whole genome shotgun sequence 658
BBVC01000140.1 Caedibacter varicaedens DNA, contig: Cva_contig000140, whole genome shotgun sequence 644
BBVC01000141.1 Caedibacter varicaedens DNA, contig: Cva_contig000141, whole genome shotgun sequence 500
BBVC01000142.1 Caedibacter varicaedens DNA, contig: Cva_contig000142, whole genome shotgun sequence 6,389

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory