fast.genomicscompare 6,575 genera of bacteria & archaea

 

2-02-FULL-39-32 sp001800135 none

Genome identifier: GCA_001800135.1

NCBI assembly name: ASM180013v1

GTDB taxonomy: Bacteria, Elusimicrobiota, Elusimicrobia, 2-02-FULL-39-32, 2-02-FULL-39-32, 2-02-FULL-39-32, 2-02-FULL-39-32 sp001800135

NCBI taxonomy: Bacteria, Elusimicrobiota

Scaffolds: 27

Genes: 1,883 Protein-coding: 1,805 RNAs: 48 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MGUU01000001.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1068, whole genome shotgun sequence 35,001
MGUU01000002.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_112, whole genome shotgun sequence 86,451
MGUU01000003.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1130, whole genome shotgun sequence 33,276
MGUU01000004.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1333, whole genome shotgun sequence 30,818
MGUU01000005.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_142, whole genome shotgun sequence 96,902
MGUU01000006.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1597, whole genome shotgun sequence 28,185
MGUU01000007.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1632, whole genome shotgun sequence 31,331
MGUU01000008.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_18, whole genome shotgun sequence 152,424
MGUU01000009.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_1963, whole genome shotgun sequence 25,860
MGUU01000010.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_2, whole genome shotgun sequence 372,754
MGUU01000011.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_20, whole genome shotgun sequence 150,345
MGUU01000012.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_22928, whole genome shotgun sequence 6,439
MGUU01000013.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_25, whole genome shotgun sequence 141,937
MGUU01000014.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_29, whole genome shotgun sequence 132,662
MGUU01000015.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_31928, whole genome shotgun sequence 5,225
MGUU01000016.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_39, whole genome shotgun sequence 386,443
MGUU01000017.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_485, whole genome shotgun sequence 47,212
MGUU01000018.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_53, whole genome shotgun sequence 116,425
MGUU01000019.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_5696, whole genome shotgun sequence 17,781
MGUU01000020.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_66, whole genome shotgun sequence 104,648
MGUU01000021.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_690, whole genome shotgun sequence 42,227
MGUU01000022.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_74, whole genome shotgun sequence 103,003
MGUU01000023.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_826, whole genome shotgun sequence 38,068
MGUU01000024.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_87, whole genome shotgun sequence 99,778
MGUU01000025.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_9, whole genome shotgun sequence 197,102
MGUU01000026.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_973, whole genome shotgun sequence 35,679
MGUU01000027.1 MAG: Elusimicrobia bacterium RIFCSPLOWO2_02_FULL_39_32 rifcsplowo2_02_scaffold_97530, whole genome shotgun sequence 6,617

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory