fast.genomicscompare 6,575 genera of bacteria & archaea

 

XYA2-FULL-39-19 sp001800285 none

Genome identifier: GCA_001800285.1

NCBI assembly name: ASM180028v1

GTDB taxonomy: Bacteria, Elusimicrobiota, Endomicrobiia, CG1-02-37-114, XYA2-FULL-39-19, XYA2-FULL-39-19, XYA2-FULL-39-19 sp001800285

NCBI taxonomy: Bacteria, Elusimicrobiota

Scaffolds: 86

Genes: 2,552 Protein-coding: 2,460 RNAs: 52 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MGVC01000001.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_106, whole genome shotgun sequence 103,530
MGVC01000002.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1113, whole genome shotgun sequence 21,168
MGVC01000003.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1177, whole genome shotgun sequence 25,910
MGVC01000004.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1191, whole genome shotgun sequence 23,408
MGVC01000005.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_121, whole genome shotgun sequence 82,475
MGVC01000006.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1210, whole genome shotgun sequence 16,636
MGVC01000007.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1248, whole genome shotgun sequence 30,629
MGVC01000008.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_125, whole genome shotgun sequence 131,942
MGVC01000009.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1276, whole genome shotgun sequence 15,920
MGVC01000010.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_134, whole genome shotgun sequence 68,785
MGVC01000011.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1343, whole genome shotgun sequence 16,326
MGVC01000012.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1379, whole genome shotgun sequence 15,113
MGVC01000013.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_14, whole genome shotgun sequence 185,681
MGVC01000014.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_140, whole genome shotgun sequence 67,261
MGVC01000015.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1409, whole genome shotgun sequence 18,024
MGVC01000016.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_146, whole genome shotgun sequence 75,806
MGVC01000017.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1469, whole genome shotgun sequence 14,521
MGVC01000018.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1487, whole genome shotgun sequence 22,837
MGVC01000019.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1531, whole genome shotgun sequence 14,123
MGVC01000020.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_160, whole genome shotgun sequence 81,573
MGVC01000021.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1624, whole genome shotgun sequence 13,519
MGVC01000022.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1649, whole genome shotgun sequence 13,361
MGVC01000023.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1657, whole genome shotgun sequence 13,270
MGVC01000024.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1721, whole genome shotgun sequence 15,300
MGVC01000025.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1849, whole genome shotgun sequence 20,385
MGVC01000026.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_188, whole genome shotgun sequence 56,840
MGVC01000027.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1963, whole genome shotgun sequence 11,766
MGVC01000028.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_1972, whole genome shotgun sequence 15,192
MGVC01000029.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_203, whole genome shotgun sequence 54,372
MGVC01000030.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2092, whole genome shotgun sequence 21,934
MGVC01000031.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2102, whole genome shotgun sequence 11,214
MGVC01000032.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2380, whole genome shotgun sequence 10,129
MGVC01000033.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2435, whole genome shotgun sequence 10,047
MGVC01000034.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2501, whole genome shotgun sequence 16,124
MGVC01000035.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_255, whole genome shotgun sequence 48,819
MGVC01000036.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2586, whole genome shotgun sequence 9,631
MGVC01000037.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_261, whole genome shotgun sequence 57,154
MGVC01000038.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_262, whole genome shotgun sequence 47,839
MGVC01000039.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_278, whole genome shotgun sequence 46,733
MGVC01000040.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2853, whole genome shotgun sequence 8,944
MGVC01000041.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2882, whole genome shotgun sequence 8,852
MGVC01000042.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_295, whole genome shotgun sequence 45,067
MGVC01000043.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_2962, whole genome shotgun sequence 8,697
MGVC01000044.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_298, whole genome shotgun sequence 55,559
MGVC01000045.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_3066, whole genome shotgun sequence 13,876
MGVC01000046.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_331, whole genome shotgun sequence 41,798
MGVC01000047.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_339, whole genome shotgun sequence 41,061
MGVC01000048.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_342, whole genome shotgun sequence 52,742
MGVC01000049.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_350, whole genome shotgun sequence 64,161
MGVC01000050.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_3522, whole genome shotgun sequence 7,676
MGVC01000051.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_374, whole genome shotgun sequence 38,463
MGVC01000052.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_3952, whole genome shotgun sequence 7,035
MGVC01000053.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_418, whole genome shotgun sequence 35,194
MGVC01000054.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_427, whole genome shotgun sequence 73,005
MGVC01000055.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_437, whole genome shotgun sequence 55,570
MGVC01000056.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_4435, whole genome shotgun sequence 6,379
MGVC01000057.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_447, whole genome shotgun sequence 43,961
MGVC01000058.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_460, whole genome shotgun sequence 32,930
MGVC01000059.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_4705, whole genome shotgun sequence 6,221
MGVC01000060.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_498, whole genome shotgun sequence 31,614
MGVC01000061.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_521, whole genome shotgun sequence 30,441
MGVC01000062.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_538, whole genome shotgun sequence 29,760
MGVC01000063.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_541, whole genome shotgun sequence 29,547
MGVC01000064.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_5569, whole genome shotgun sequence 5,508
MGVC01000065.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_5742, whole genome shotgun sequence 7,984
MGVC01000066.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_5969, whole genome shotgun sequence 6,108
MGVC01000067.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_612, whole genome shotgun sequence 27,511
MGVC01000068.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_631, whole genome shotgun sequence 51,072
MGVC01000069.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_672, whole genome shotgun sequence 26,266
MGVC01000070.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_6721, whole genome shotgun sequence 5,870
MGVC01000071.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_68, whole genome shotgun sequence 93,641
MGVC01000072.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_6862, whole genome shotgun sequence 7,911
MGVC01000073.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_691, whole genome shotgun sequence 25,343
MGVC01000074.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_748, whole genome shotgun sequence 25,321
MGVC01000075.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_75, whole genome shotgun sequence 90,330
MGVC01000076.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_769, whole genome shotgun sequence 23,441
MGVC01000077.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_770, whole genome shotgun sequence 23,443
MGVC01000078.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_79, whole genome shotgun sequence 89,632
MGVC01000079.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_791, whole genome shotgun sequence 23,127
MGVC01000080.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_833, whole genome shotgun sequence 22,346
MGVC01000081.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_84, whole genome shotgun sequence 116,855
MGVC01000082.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_861, whole genome shotgun sequence 30,803
MGVC01000083.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_871, whole genome shotgun sequence 22,121
MGVC01000084.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_976, whole genome shotgun sequence 44,552
MGVC01000085.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_9838, whole genome shotgun sequence 7,208
MGVC01000086.1 MAG: Elusimicrobia bacterium RIFOXYA2_FULL_39_19 rifoxya2_full_scaffold_989, whole genome shotgun sequence 20,856

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory