fast.genomicscompare 6,575 genera of bacteria & archaea

 

XYD12-FULL-36-8 sp001803045 none

Genome identifier: GCA_001803045.1

NCBI assembly name: ASM180304v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Ignavibacteriaceae, XYD12-FULL-36-8, XYD12-FULL-36-8 sp001803045

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 95

Genes: 3,527 Protein-coding: 3,412 RNAs: 49 pseudogenes: 66

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MHAR01000001.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1054, whole genome shotgun sequence 11,998
MHAR01000002.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1102, whole genome shotgun sequence 13,675
MHAR01000003.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1108, whole genome shotgun sequence 11,696
MHAR01000004.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_113, whole genome shotgun sequence 47,804
MHAR01000005.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1149, whole genome shotgun sequence 11,457
MHAR01000006.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_12, whole genome shotgun sequence 146,864
MHAR01000007.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1277, whole genome shotgun sequence 10,567
MHAR01000008.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_13, whole genome shotgun sequence 200,971
MHAR01000009.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_132, whole genome shotgun sequence 43,667
MHAR01000010.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_133, whole genome shotgun sequence 43,647
MHAR01000011.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_136, whole genome shotgun sequence 43,083
MHAR01000012.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_14, whole genome shotgun sequence 147,165
MHAR01000013.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_150, whole genome shotgun sequence 40,572
MHAR01000014.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_156, whole genome shotgun sequence 65,260
MHAR01000015.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_158, whole genome shotgun sequence 40,779
MHAR01000016.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1582, whole genome shotgun sequence 9,152
MHAR01000017.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1664, whole genome shotgun sequence 11,464
MHAR01000018.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_17, whole genome shotgun sequence 132,704
MHAR01000019.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_1700, whole genome shotgun sequence 8,582
MHAR01000020.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_171, whole genome shotgun sequence 37,567
MHAR01000021.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_19, whole genome shotgun sequence 157,015
MHAR01000022.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_191, whole genome shotgun sequence 35,400
MHAR01000023.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_20, whole genome shotgun sequence 118,752
MHAR01000024.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_200, whole genome shotgun sequence 39,877
MHAR01000025.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_208, whole genome shotgun sequence 33,976
MHAR01000026.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_209, whole genome shotgun sequence 33,646
MHAR01000027.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_20944, whole genome shotgun sequence 1,884
MHAR01000028.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_23, whole genome shotgun sequence 108,873
MHAR01000029.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_230, whole genome shotgun sequence 31,915
MHAR01000030.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_232, whole genome shotgun sequence 40,386
MHAR01000031.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_2344, whole genome shotgun sequence 7,063
MHAR01000032.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_2486, whole genome shotgun sequence 6,702
MHAR01000033.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_25, whole genome shotgun sequence 95,798
MHAR01000034.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_2513, whole genome shotgun sequence 6,641
MHAR01000035.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_2529, whole genome shotgun sequence 6,597
MHAR01000036.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_254, whole genome shotgun sequence 30,113
MHAR01000037.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_266, whole genome shotgun sequence 29,328
MHAR01000038.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_269, whole genome shotgun sequence 48,102
MHAR01000039.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_27, whole genome shotgun sequence 105,431
MHAR01000040.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_273, whole genome shotgun sequence 29,034
MHAR01000041.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_278, whole genome shotgun sequence 28,550
MHAR01000042.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_291, whole genome shotgun sequence 28,355
MHAR01000043.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_293, whole genome shotgun sequence 32,904
MHAR01000044.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_295, whole genome shotgun sequence 27,715
MHAR01000045.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_296, whole genome shotgun sequence 27,606
MHAR01000046.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_3096, whole genome shotgun sequence 5,736
MHAR01000047.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_317, whole genome shotgun sequence 38,829
MHAR01000048.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_32, whole genome shotgun sequence 81,760
MHAR01000049.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_327, whole genome shotgun sequence 26,457
MHAR01000050.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_335, whole genome shotgun sequence 41,483
MHAR01000051.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_3411, whole genome shotgun sequence 6,851
MHAR01000052.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_346, whole genome shotgun sequence 25,399
MHAR01000053.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_35, whole genome shotgun sequence 78,080
MHAR01000054.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_361, whole genome shotgun sequence 24,987
MHAR01000055.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_365, whole genome shotgun sequence 24,699
MHAR01000056.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_37, whole genome shotgun sequence 76,574
MHAR01000057.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_385, whole genome shotgun sequence 24,236
MHAR01000058.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_393, whole genome shotgun sequence 23,827
MHAR01000059.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_396, whole genome shotgun sequence 23,676
MHAR01000060.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_40, whole genome shotgun sequence 108,493
MHAR01000061.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_414, whole genome shotgun sequence 22,989
MHAR01000062.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_444, whole genome shotgun sequence 22,727
MHAR01000063.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_459, whole genome shotgun sequence 27,511
MHAR01000064.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_47, whole genome shotgun sequence 66,469
MHAR01000065.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_493, whole genome shotgun sequence 20,500
MHAR01000066.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_50, whole genome shotgun sequence 74,301
MHAR01000067.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_531, whole genome shotgun sequence 19,428
MHAR01000068.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_543, whole genome shotgun sequence 18,934
MHAR01000069.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_55, whole genome shotgun sequence 63,737
MHAR01000070.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_561, whole genome shotgun sequence 18,873
MHAR01000071.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_57, whole genome shotgun sequence 67,295
MHAR01000072.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_584, whole genome shotgun sequence 18,241
MHAR01000073.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_604, whole genome shotgun sequence 17,838
MHAR01000074.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_616, whole genome shotgun sequence 17,590
MHAR01000075.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_629, whole genome shotgun sequence 17,351
MHAR01000076.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_66, whole genome shotgun sequence 59,338
MHAR01000077.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_671, whole genome shotgun sequence 16,777
MHAR01000078.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_676, whole genome shotgun sequence 16,595
MHAR01000079.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_68, whole genome shotgun sequence 58,571
MHAR01000080.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_70, whole genome shotgun sequence 88,542
MHAR01000081.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_711, whole genome shotgun sequence 16,073
MHAR01000082.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_726, whole genome shotgun sequence 15,818
MHAR01000083.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_740, whole genome shotgun sequence 25,398
MHAR01000084.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_755, whole genome shotgun sequence 15,448
MHAR01000085.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_78, whole genome shotgun sequence 55,225
MHAR01000086.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_80, whole genome shotgun sequence 54,741
MHAR01000087.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_81, whole genome shotgun sequence 93,146
MHAR01000088.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_8178, whole genome shotgun sequence 3,153
MHAR01000089.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_828, whole genome shotgun sequence 14,431
MHAR01000090.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_85, whole genome shotgun sequence 70,672
MHAR01000091.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_87, whole genome shotgun sequence 74,321
MHAR01000092.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_873, whole genome shotgun sequence 13,844
MHAR01000093.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_89, whole genome shotgun sequence 54,001
MHAR01000094.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_9415, whole genome shotgun sequence 5,467
MHAR01000095.1 MAG: Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_98, whole genome shotgun sequence 52,086

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory