fast.genomicscompare 6,575 genera of bacteria & archaea

 

RBG-16-49-21 sp001829495 none

Genome identifier: GCA_001829495.1

NCBI assembly name: ASM182949v1

GTDB taxonomy: Bacteria, Spirochaetota, UBA4802, UBA4802, UBA5550, RBG-16-49-21, RBG-16-49-21 sp001829495

NCBI taxonomy: Bacteria, Spirochaetota

Scaffolds: 83

Genes: 3,535 Protein-coding: 3,413 RNAs: 49 pseudogenes: 73

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MIBJ01000001.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_103, whole genome shotgun sequence 120,513
MIBJ01000002.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_10437, whole genome shotgun sequence 7,797
MIBJ01000003.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_10901, whole genome shotgun sequence 8,935
MIBJ01000004.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1109, whole genome shotgun sequence 100,661
MIBJ01000005.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_11242, whole genome shotgun sequence 10,419
MIBJ01000006.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1172, whole genome shotgun sequence 36,027
MIBJ01000007.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_11781, whole genome shotgun sequence 10,613
MIBJ01000008.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1195, whole genome shotgun sequence 70,818
MIBJ01000009.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1226, whole genome shotgun sequence 37,099
MIBJ01000010.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_13250, whole genome shotgun sequence 6,925
MIBJ01000011.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_13404, whole genome shotgun sequence 20,799
MIBJ01000012.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_13569, whole genome shotgun sequence 9,859
MIBJ01000013.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1376, whole genome shotgun sequence 19,874
MIBJ01000014.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1490, whole genome shotgun sequence 42,653
MIBJ01000015.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1523, whole genome shotgun sequence 62,251
MIBJ01000016.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1570, whole genome shotgun sequence 37,276
MIBJ01000017.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_160, whole genome shotgun sequence 175,028
MIBJ01000018.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_162, whole genome shotgun sequence 46,262
MIBJ01000019.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_16622, whole genome shotgun sequence 6,708
MIBJ01000020.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_17558, whole genome shotgun sequence 12,922
MIBJ01000021.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1771, whole genome shotgun sequence 38,888
MIBJ01000022.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_18, whole genome shotgun sequence 81,058
MIBJ01000023.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_1932, whole genome shotgun sequence 53,250
MIBJ01000024.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2003, whole genome shotgun sequence 22,864
MIBJ01000025.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_201, whole genome shotgun sequence 52,739
MIBJ01000026.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2011, whole genome shotgun sequence 25,785
MIBJ01000027.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2215, whole genome shotgun sequence 41,647
MIBJ01000028.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_223, whole genome shotgun sequence 39,408
MIBJ01000029.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2244, whole genome shotgun sequence 36,912
MIBJ01000030.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2267, whole genome shotgun sequence 28,416
MIBJ01000031.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_233, whole genome shotgun sequence 42,959
MIBJ01000032.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2363, whole genome shotgun sequence 34,393
MIBJ01000033.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2389, whole genome shotgun sequence 29,713
MIBJ01000034.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2421, whole genome shotgun sequence 36,960
MIBJ01000035.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_24241, whole genome shotgun sequence 9,692
MIBJ01000036.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_268, whole genome shotgun sequence 47,313
MIBJ01000037.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_271, whole genome shotgun sequence 173,186
MIBJ01000038.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_28931, whole genome shotgun sequence 9,429
MIBJ01000039.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_2987, whole genome shotgun sequence 18,316
MIBJ01000040.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_304, whole genome shotgun sequence 49,724
MIBJ01000041.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_306, whole genome shotgun sequence 71,351
MIBJ01000042.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_32946, whole genome shotgun sequence 6,630
MIBJ01000043.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_35396, whole genome shotgun sequence 7,718
MIBJ01000044.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_3604, whole genome shotgun sequence 13,051
MIBJ01000045.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_380, whole genome shotgun sequence 167,958
MIBJ01000046.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_40, whole genome shotgun sequence 138,039
MIBJ01000047.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_4157, whole genome shotgun sequence 42,831
MIBJ01000048.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_42, whole genome shotgun sequence 131,682
MIBJ01000049.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_438, whole genome shotgun sequence 73,862
MIBJ01000050.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_4431, whole genome shotgun sequence 18,326
MIBJ01000051.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_510, whole genome shotgun sequence 42,281
MIBJ01000052.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_5176, whole genome shotgun sequence 35,804
MIBJ01000053.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_5453, whole genome shotgun sequence 10,787
MIBJ01000054.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_5474, whole genome shotgun sequence 26,263
MIBJ01000055.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_557, whole genome shotgun sequence 58,829
MIBJ01000056.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_561, whole genome shotgun sequence 91,660
MIBJ01000057.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_569, whole genome shotgun sequence 98,044
MIBJ01000058.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_579, whole genome shotgun sequence 29,258
MIBJ01000059.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_5796, whole genome shotgun sequence 11,463
MIBJ01000060.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_612, whole genome shotgun sequence 27,343
MIBJ01000061.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_614, whole genome shotgun sequence 60,047
MIBJ01000062.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_621, whole genome shotgun sequence 100,670
MIBJ01000063.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_6615, whole genome shotgun sequence 12,969
MIBJ01000064.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_6743, whole genome shotgun sequence 9,698
MIBJ01000065.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_705, whole genome shotgun sequence 80,019
MIBJ01000066.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_7285, whole genome shotgun sequence 14,832
MIBJ01000067.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_75356, whole genome shotgun sequence 7,481
MIBJ01000068.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_8, whole genome shotgun sequence 119,754
MIBJ01000069.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_8115, whole genome shotgun sequence 26,481
MIBJ01000070.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_813, whole genome shotgun sequence 79,303
MIBJ01000071.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_8139, whole genome shotgun sequence 16,429
MIBJ01000072.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_8168, whole genome shotgun sequence 8,876
MIBJ01000073.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_82098, whole genome shotgun sequence 6,304
MIBJ01000074.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_826, whole genome shotgun sequence 35,603
MIBJ01000075.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_828, whole genome shotgun sequence 29,786
MIBJ01000076.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_8378, whole genome shotgun sequence 13,318
MIBJ01000077.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_859, whole genome shotgun sequence 25,191
MIBJ01000078.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_883, whole genome shotgun sequence 98,520
MIBJ01000079.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_89, whole genome shotgun sequence 63,795
MIBJ01000080.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_895, whole genome shotgun sequence 46,169
MIBJ01000081.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_9320, whole genome shotgun sequence 27,231
MIBJ01000082.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_950, whole genome shotgun sequence 69,878
MIBJ01000083.1 MAG: Spirochaetes bacterium RBG_16_49_21 RBG_16_scaffold_980, whole genome shotgun sequence 27,192

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory