fast.genomicscompare 6,575 genera of bacteria & archaea

 

2-02-FULL-58-16 sp001830425 none

Genome identifier: GCA_001830455.1

NCBI assembly name: ASM183045v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales_A, 2-02-FULL-58-16, 2-02-FULL-58-16, 2-02-FULL-58-16 sp001830425

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales

Scaffolds: 72

Genes: 2,704 Protein-coding: 2,588 RNAs: 53 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MIAB01000001.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_10249, whole genome shotgun sequence 10,120
MIAB01000002.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_10913, whole genome shotgun sequence 17,877
MIAB01000003.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_11484, whole genome shotgun sequence 15,312
MIAB01000004.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1170, whole genome shotgun sequence 88,121
MIAB01000005.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1176, whole genome shotgun sequence 36,405
MIAB01000006.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1194, whole genome shotgun sequence 49,188
MIAB01000007.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1195, whole genome shotgun sequence 32,367
MIAB01000008.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1231, whole genome shotgun sequence 85,643
MIAB01000009.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_12759, whole genome shotgun sequence 8,911
MIAB01000010.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_12967, whole genome shotgun sequence 9,952
MIAB01000011.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_13582, whole genome shotgun sequence 8,966
MIAB01000012.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_14073, whole genome shotgun sequence 17,504
MIAB01000013.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_14911, whole genome shotgun sequence 8,178
MIAB01000014.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_15626, whole genome shotgun sequence 7,954
MIAB01000015.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_15656, whole genome shotgun sequence 7,935
MIAB01000016.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_16554, whole genome shotgun sequence 7,677
MIAB01000017.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_16751, whole genome shotgun sequence 8,046
MIAB01000018.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1724, whole genome shotgun sequence 63,932
MIAB01000019.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_17796, whole genome shotgun sequence 14,297
MIAB01000020.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_18334, whole genome shotgun sequence 7,207
MIAB01000021.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1858, whole genome shotgun sequence 25,560
MIAB01000022.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1883, whole genome shotgun sequence 25,385
MIAB01000023.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1922, whole genome shotgun sequence 25,666
MIAB01000024.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_1985, whole genome shotgun sequence 26,567
MIAB01000025.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2170, whole genome shotgun sequence 23,850
MIAB01000026.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2280, whole genome shotgun sequence 22,931
MIAB01000027.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2415, whole genome shotgun sequence 40,558
MIAB01000028.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_242, whole genome shotgun sequence 134,740
MIAB01000029.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_244, whole genome shotgun sequence 95,078
MIAB01000030.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_24683, whole genome shotgun sequence 10,961
MIAB01000031.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2480, whole genome shotgun sequence 22,019
MIAB01000032.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2543, whole genome shotgun sequence 25,185
MIAB01000033.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_268, whole genome shotgun sequence 83,271
MIAB01000034.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2720, whole genome shotgun sequence 20,969
MIAB01000035.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_27310, whole genome shotgun sequence 8,352
MIAB01000036.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2848, whole genome shotgun sequence 27,651
MIAB01000037.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_286, whole genome shotgun sequence 145,268
MIAB01000038.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2882, whole genome shotgun sequence 31,597
MIAB01000039.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2926, whole genome shotgun sequence 20,191
MIAB01000040.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_2984, whole genome shotgun sequence 39,744
MIAB01000041.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_300, whole genome shotgun sequence 110,474
MIAB01000042.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3038, whole genome shotgun sequence 20,177
MIAB01000043.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_31052, whole genome shotgun sequence 9,963
MIAB01000044.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3159, whole genome shotgun sequence 28,185
MIAB01000045.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3167, whole genome shotgun sequence 20,942
MIAB01000046.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3293, whole genome shotgun sequence 25,601
MIAB01000047.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_332, whole genome shotgun sequence 90,147
MIAB01000048.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3622, whole genome shotgun sequence 18,346
MIAB01000049.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_371, whole genome shotgun sequence 94,741
MIAB01000050.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_375, whole genome shotgun sequence 122,142
MIAB01000051.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_379, whole genome shotgun sequence 120,030
MIAB01000052.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_3805, whole genome shotgun sequence 37,954
MIAB01000053.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_388, whole genome shotgun sequence 57,510
MIAB01000054.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_402, whole genome shotgun sequence 58,460
MIAB01000055.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_4289, whole genome shotgun sequence 24,189
MIAB01000056.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_4770, whole genome shotgun sequence 15,573
MIAB01000057.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_480, whole genome shotgun sequence 49,081
MIAB01000058.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_4823, whole genome shotgun sequence 27,919
MIAB01000059.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_5135, whole genome shotgun sequence 25,700
MIAB01000060.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_5505, whole genome shotgun sequence 14,806
MIAB01000061.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_5918, whole genome shotgun sequence 20,537
MIAB01000062.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_607, whole genome shotgun sequence 43,874
MIAB01000063.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_6541, whole genome shotgun sequence 13,050
MIAB01000064.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_6777, whole genome shotgun sequence 32,493
MIAB01000065.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_7077, whole genome shotgun sequence 20,574
MIAB01000066.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_72732, whole genome shotgun sequence 6,481
MIAB01000067.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_7705, whole genome shotgun sequence 11,933
MIAB01000068.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_786, whole genome shotgun sequence 79,715
MIAB01000069.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_791, whole genome shotgun sequence 65,271
MIAB01000070.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_8601, whole genome shotgun sequence 33,600
MIAB01000071.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_870, whole genome shotgun sequence 80,340
MIAB01000072.1 MAG: Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 rifcsplowo2_12_scaffold_8965, whole genome shotgun sequence 10,971

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory