fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA1573 sp001871905 CG1_02_46_17

Genome identifier: GCA_001871905.1

NCBI assembly name: ASM187190v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micavibrionales, Micavibrionaceae, UBA1573, UBA1573 sp001871905

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 40

Genes: 2,066 Protein-coding: 1,983 RNAs: 46 pseudogenes: 37

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MNUG01000001.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_1137_c, whole genome shotgun sequence 28,396
MNUG01000002.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_2423_c, whole genome shotgun sequence 18,936
MNUG01000003.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_12095_c, whole genome shotgun sequence 6,519
MNUG01000004.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_731_c, whole genome shotgun sequence 35,187
MNUG01000005.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_1829_c, whole genome shotgun sequence 22,128
MNUG01000006.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_2627_c, whole genome shotgun sequence 18,056
MNUG01000007.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_218_c, whole genome shotgun sequence 106,346
MNUG01000008.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_1586_c, whole genome shotgun sequence 23,639
MNUG01000009.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_7_c, whole genome shotgun sequence 232,463
MNUG01000010.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_13096_c, whole genome shotgun sequence 6,281
MNUG01000011.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_8516_c, whole genome shotgun sequence 8,362
MNUG01000012.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_246_c, whole genome shotgun sequence 60,393
MNUG01000013.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_197_c, whole genome shotgun sequence 62,504
MNUG01000014.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_179_c, whole genome shotgun sequence 64,942
MNUG01000015.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_9530_c, whole genome shotgun sequence 7,944
MNUG01000016.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_419_c, whole genome shotgun sequence 45,260
MNUG01000017.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_12_c, whole genome shotgun sequence 197,531
MNUG01000018.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_75_c, whole genome shotgun sequence 106,112
MNUG01000019.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_15_c, whole genome shotgun sequence 170,514
MNUG01000020.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_1089_c, whole genome shotgun sequence 28,956
MNUG01000021.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_114_c, whole genome shotgun sequence 79,398
MNUG01000022.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_739_c, whole genome shotgun sequence 35,287
MNUG01000023.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_4006_c, whole genome shotgun sequence 14,100
MNUG01000024.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_226_c, whole genome shotgun sequence 58,382
MNUG01000025.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_3685_c, whole genome shotgun sequence 14,749
MNUG01000026.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_659_c, whole genome shotgun sequence 37,020
MNUG01000027.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_14673_c, whole genome shotgun sequence 5,645
MNUG01000028.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_12333_c, whole genome shotgun sequence 6,558
MNUG01000029.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_73_c, whole genome shotgun sequence 96,217
MNUG01000030.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_706_c, whole genome shotgun sequence 36,023
MNUG01000031.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_378_c, whole genome shotgun sequence 47,502
MNUG01000032.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_97_c, whole genome shotgun sequence 85,144
MNUG01000033.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_12138_c, whole genome shotgun sequence 6,511
MNUG01000034.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_5981_c, whole genome shotgun sequence 11,082
MNUG01000035.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_2550_c, whole genome shotgun sequence 18,357
MNUG01000036.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_449_c, whole genome shotgun sequence 43,945
MNUG01000037.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_13934_c, whole genome shotgun sequence 10,163
MNUG01000038.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_520_c, whole genome shotgun sequence 41,384
MNUG01000039.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_524_c, whole genome shotgun sequence 41,292
MNUG01000040.1 MAG: Alphaproteobacteria bacterium CG1_02_46_17 cg1_0.2_scaffold_35_c, whole genome shotgun sequence 126,638

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory