fast.genomicscompare 6,575 genera of bacteria & archaea

 

40-19 sp001898075 40-19

Genome identifier: GCA_001898075.1

NCBI assembly name: ASM189807v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Holosporales, Holosporaceae, 40-19, 40-19 sp001898075

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 1

Genes: 1,011 Protein-coding: 947 RNAs: 49 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MKSD01000001.1 MAG: Alphaproteobacteria bacterium 40-19 SCNpilot_bf_inoc_scaffold_3, whole genome shotgun sequence 988,388

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory