fast.genomicscompare 6,575 genera of bacteria & archaea

 

Kapaibacterium thiocyanatum 59-99

Genome identifier: GCA_001899175.1

NCBI assembly name: ASM189917v1

GTDB taxonomy: Bacteria, Bacteroidota, Kapaibacteriia, Kapaibacteriales, Kapaibacteriaceae, Kapaibacterium, Kapaibacterium thiocyanatum

NCBI taxonomy: Bacteria, Candidatus Kapabacteria, Candidatus Kapabacteria thiocyanatum

Scaffolds: 28

Genes: 2,739 Protein-coding: 2,656 RNAs: 48 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MKVH01000001.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_15995, whole genome shotgun sequence 2,512
MKVH01000002.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_17, whole genome shotgun sequence 375,615
MKVH01000003.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_20, whole genome shotgun sequence 380,878
MKVH01000004.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_20055, whole genome shotgun sequence 2,055
MKVH01000005.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_20084, whole genome shotgun sequence 2,076
MKVH01000006.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_21548, whole genome shotgun sequence 5,647
MKVH01000007.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_23579, whole genome shotgun sequence 2,694
MKVH01000008.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_238, whole genome shotgun sequence 174,098
MKVH01000009.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_263, whole genome shotgun sequence 91,552
MKVH01000010.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_26546, whole genome shotgun sequence 1,642
MKVH01000011.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_28634, whole genome shotgun sequence 1,537
MKVH01000012.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_30598, whole genome shotgun sequence 1,458
MKVH01000013.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_34, whole genome shotgun sequence 291,142
MKVH01000014.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_361, whole genome shotgun sequence 74,861
MKVH01000015.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_375, whole genome shotgun sequence 72,179
MKVH01000016.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_40721, whole genome shotgun sequence 1,139
MKVH01000017.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_412, whole genome shotgun sequence 67,026
MKVH01000018.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_42587, whole genome shotgun sequence 1,076
MKVH01000019.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_452, whole genome shotgun sequence 59,203
MKVH01000020.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_481, whole genome shotgun sequence 81,111
MKVH01000021.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_55, whole genome shotgun sequence 373,065
MKVH01000022.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_6375, whole genome shotgun sequence 5,157
MKVH01000023.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_7639, whole genome shotgun sequence 5,787
MKVH01000024.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_8, whole genome shotgun sequence 951,664
MKVH01000025.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_85, whole genome shotgun sequence 233,759
MKVH01000026.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_8849, whole genome shotgun sequence 4,029
MKVH01000027.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_9370, whole genome shotgun sequence 4,475
MKVH01000028.1 MAG: Candidatus Kapaibacterium thiocyanatum isolate 59-99 SCNpilot_expt_1000_bf_scaffold_9415, whole genome shotgun sequence 5,549

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory