fast.genomicscompare 6,575 genera of bacteria & archaea

 

66-474 sp001899805 66-474

Genome identifier: GCA_001899805.1

NCBI assembly name: ASM189980v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Rhodanobacteraceae, 66-474, 66-474 sp001899805

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales

Scaffolds: 16

Genes: 3,302 Protein-coding: 3,202 RNAs: 53 pseudogenes: 47

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MKWP01000001.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_113, whole genome shotgun sequence 350,883
MKWP01000002.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_142, whole genome shotgun sequence 331,995
MKWP01000003.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_18606, whole genome shotgun sequence 1,808
MKWP01000004.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_193, whole genome shotgun sequence 320,727
MKWP01000005.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_1975, whole genome shotgun sequence 16,402
MKWP01000006.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_22057, whole genome shotgun sequence 1,606
MKWP01000007.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_224, whole genome shotgun sequence 134,081
MKWP01000008.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_242, whole genome shotgun sequence 152,703
MKWP01000009.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_252, whole genome shotgun sequence 199,775
MKWP01000010.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_260, whole genome shotgun sequence 71,764
MKWP01000011.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_2838, whole genome shotgun sequence 6,972
MKWP01000012.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_34487, whole genome shotgun sequence 1,181
MKWP01000013.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_34733, whole genome shotgun sequence 1,175
MKWP01000014.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_38, whole genome shotgun sequence 687,996
MKWP01000015.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_5, whole genome shotgun sequence 1,087,631
MKWP01000016.1 MAG: Xanthomonadales bacterium 66-474 SCNpilot_bf_inoc_scaffold_59, whole genome shotgun sequence 362,089

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory