fast.genomicscompare 6,575 genera of bacteria & archaea

 

51-20 sp001917175 51_20

Genome identifier: GCA_001917175.1

NCBI assembly name: ASM191717v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, RF32, CAG-239, 51-20, 51-20 sp001917175

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Azospirillum

Scaffolds: 41

Genes: 2,006 Protein-coding: 1,902 RNAs: 53 pseudogenes: 51

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MNTV01000001.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3053, whole genome shotgun sequence 14,628
MNTV01000002.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3117, whole genome shotgun sequence 14,317
MNTV01000003.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3437, whole genome shotgun sequence 12,801
MNTV01000004.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3483, whole genome shotgun sequence 22,012
MNTV01000005.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3764, whole genome shotgun sequence 11,818
MNTV01000006.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_3945, whole genome shotgun sequence 12,607
MNTV01000007.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_4128, whole genome shotgun sequence 10,195
MNTV01000008.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_4384, whole genome shotgun sequence 15,666
MNTV01000009.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_4547, whole genome shotgun sequence 20,412
MNTV01000010.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_4553, whole genome shotgun sequence 9,015
MNTV01000011.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_8108, whole genome shotgun sequence 4,355
MNTV01000012.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_11179, whole genome shotgun sequence 3,026
MNTV01000013.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_11819, whole genome shotgun sequence 4,614
MNTV01000014.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_12354, whole genome shotgun sequence 5,584
MNTV01000015.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_12617, whole genome shotgun sequence 2,687
MNTV01000016.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_14466, whole genome shotgun sequence 3,205
MNTV01000017.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_17170, whole genome shotgun sequence 2,005
MNTV01000018.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_175, whole genome shotgun sequence 140,208
MNTV01000019.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_227, whole genome shotgun sequence 105,583
MNTV01000020.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_239, whole genome shotgun sequence 267,308
MNTV01000021.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_973, whole genome shotgun sequence 46,862
MNTV01000022.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_974, whole genome shotgun sequence 69,526
MNTV01000023.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_1027, whole genome shotgun sequence 42,912
MNTV01000024.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_1107, whole genome shotgun sequence 40,291
MNTV01000025.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_1126, whole genome shotgun sequence 57,106
MNTV01000026.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_1141, whole genome shotgun sequence 67,155
MNTV01000027.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_1706, whole genome shotgun sequence 27,637
MNTV01000028.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_2467, whole genome shotgun sequence 18,825
MNTV01000029.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_2609, whole genome shotgun sequence 22,275
MNTV01000030.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_2859, whole genome shotgun sequence 15,704
MNTV01000031.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_291, whole genome shotgun sequence 131,166
MNTV01000032.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_438, whole genome shotgun sequence 159,546
MNTV01000033.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_696, whole genome shotgun sequence 104,909
MNTV01000034.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_746, whole genome shotgun sequence 53,137
MNTV01000035.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_823, whole genome shotgun sequence 59,967
MNTV01000036.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_862, whole genome shotgun sequence 47,363
MNTV01000037.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_863, whole genome shotgun sequence 119,159
MNTV01000038.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_904, whole genome shotgun sequence 46,036
MNTV01000039.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_909, whole genome shotgun sequence 51,423
MNTV01000040.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_934, whole genome shotgun sequence 57,987
MNTV01000041.1 MAG: Azospirillum sp. 51_20 Ley3_66761_scaffold_971, whole genome shotgun sequence 59,050

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory