fast.genomicscompare 6,575 genera of bacteria & archaea

 

Clostridium_Y thermoalcaliphilum DSM 7309

Genome identifier: GCA_002029295.1

NCBI assembly name: ASM202929v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Peptostreptococcaceae, Clostridium_Y, Clostridium_Y thermoalcaliphilum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Peptostreptococcaceae, [Clostridium] thermoalcaliphilum

Scaffolds: 40

Genes: 2,103 Protein-coding: 2,027 RNAs: 76 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MZGW01000001.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000001, whole genome shotgun sequence 549,428
MZGW01000002.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000002, whole genome shotgun sequence 345,700
MZGW01000003.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000003, whole genome shotgun sequence 334,557
MZGW01000004.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000004, whole genome shotgun sequence 159,072
MZGW01000005.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000005, whole genome shotgun sequence 101,538
MZGW01000006.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000006, whole genome shotgun sequence 99,879
MZGW01000007.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000007, whole genome shotgun sequence 68,832
MZGW01000008.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000008, whole genome shotgun sequence 68,313
MZGW01000009.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000009, whole genome shotgun sequence 67,615
MZGW01000010.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000010, whole genome shotgun sequence 64,203
MZGW01000011.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000011, whole genome shotgun sequence 47,247
MZGW01000012.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000012, whole genome shotgun sequence 40,767
MZGW01000013.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000013, whole genome shotgun sequence 21,469
MZGW01000014.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000014, whole genome shotgun sequence 13,349
MZGW01000015.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000015, whole genome shotgun sequence 7,567
MZGW01000016.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000016, whole genome shotgun sequence 6,876
MZGW01000017.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000017, whole genome shotgun sequence 5,625
MZGW01000018.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000018, whole genome shotgun sequence 2,182
MZGW01000019.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000019, whole genome shotgun sequence 2,091
MZGW01000020.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000020, whole genome shotgun sequence 1,844
MZGW01000021.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000021, whole genome shotgun sequence 1,681
MZGW01000022.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000022, whole genome shotgun sequence 1,574
MZGW01000023.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000023, whole genome shotgun sequence 1,494
MZGW01000024.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000024, whole genome shotgun sequence 1,364
MZGW01000025.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000025, whole genome shotgun sequence 1,136
MZGW01000026.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000026, whole genome shotgun sequence 1,013
MZGW01000027.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000027, whole genome shotgun sequence 894
MZGW01000028.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000028, whole genome shotgun sequence 863
MZGW01000029.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000029, whole genome shotgun sequence 793
MZGW01000030.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000030, whole genome shotgun sequence 703
MZGW01000031.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000031, whole genome shotgun sequence 640
MZGW01000032.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000032, whole genome shotgun sequence 631
MZGW01000033.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000033, whole genome shotgun sequence 617
MZGW01000034.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000034, whole genome shotgun sequence 583
MZGW01000035.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000035, whole genome shotgun sequence 583
MZGW01000036.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000036, whole genome shotgun sequence 579
MZGW01000037.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000037, whole genome shotgun sequence 559
MZGW01000038.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000038, whole genome shotgun sequence 555
MZGW01000039.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000039, whole genome shotgun sequence 548
MZGW01000040.1 Alkalithermobacter paradoxus strain DSM 7309 CLOTH_contig000040, whole genome shotgun sequence 524

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory