fast.genomicscompare 6,575 genera of bacteria & archaea

 

OLB4 sp002050165 UTCHB1

Genome identifier: GCA_002050165.1

NCBI assembly name: ASM205016v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, SJA-28, B-1AR, OLB4, OLB4 sp002050165

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales

Scaffolds: 19

Genes: 2,137 Protein-coding: 2,079 RNAs: 47 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
MWSW01000001.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_3367, whole genome shotgun sequence 3,758
MWSW01000002.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_1442, whole genome shotgun sequence 4,265
MWSW01000003.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_240, whole genome shotgun sequence 6,373
MWSW01000004.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_247, whole genome shotgun sequence 131,599
MWSW01000005.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_319, whole genome shotgun sequence 139,027
MWSW01000006.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_282, whole genome shotgun sequence 28,991
MWSW01000007.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_113, whole genome shotgun sequence 110,037
MWSW01000008.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_73, whole genome shotgun sequence 85,933
MWSW01000009.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_535, whole genome shotgun sequence 11,843
MWSW01000010.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_56, whole genome shotgun sequence 219,197
MWSW01000011.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_92, whole genome shotgun sequence 133,934
MWSW01000012.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_24, whole genome shotgun sequence 541,168
MWSW01000013.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_128, whole genome shotgun sequence 71,998
MWSW01000014.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_103, whole genome shotgun sequence 209,370
MWSW01000015.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_586, whole genome shotgun sequence 43,287
MWSW01000016.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_298, whole genome shotgun sequence 173,356
MWSW01000017.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_202, whole genome shotgun sequence 53,967
MWSW01000018.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_191, whole genome shotgun sequence 244,795
MWSW01000019.1 MAG: Ignavibacteriales bacterium UTCHB1 contig_141, whole genome shotgun sequence 211,700

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory