fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA2136 sp002328405 ARS4

Genome identifier: GCA_002687415.1

NCBI assembly name: ASM268741v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, UBA1280, UBA2136, UBA2136, UBA2136 sp002328405

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Magnetococcales

Scaffolds: 13

Genes: 1,827 Protein-coding: 1,778 RNAs: 44 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZAD01000001.1 MAG: Magnetococcales bacterium isolate ARS4 55630, whole genome shotgun sequence 278,926
NZAD01000002.1 MAG: Magnetococcales bacterium isolate ARS4 56543, whole genome shotgun sequence 185,551
NZAD01000003.1 MAG: Magnetococcales bacterium isolate ARS4 57623, whole genome shotgun sequence 85,007
NZAD01000004.1 MAG: Magnetococcales bacterium isolate ARS4 57751, whole genome shotgun sequence 191,688
NZAD01000005.1 MAG: Magnetococcales bacterium isolate ARS4 58448, whole genome shotgun sequence 802,501
NZAD01000006.1 MAG: Magnetococcales bacterium isolate ARS4 73282, whole genome shotgun sequence 14,756
NZAD01000007.1 MAG: Magnetococcales bacterium isolate ARS4 73384, whole genome shotgun sequence 72,913
NZAD01000008.1 MAG: Magnetococcales bacterium isolate ARS4 81287, whole genome shotgun sequence 13,149
NZAD01000009.1 MAG: Magnetococcales bacterium isolate ARS4 MHASMcontig_313071, whole genome shotgun sequence 19,312
NZAD01000010.1 MAG: Magnetococcales bacterium isolate ARS4 MHASMcontig_330209, whole genome shotgun sequence 19,975
NZAD01000011.1 MAG: Magnetococcales bacterium isolate ARS4 MHASMcontig_435632, whole genome shotgun sequence 8,848
NZAD01000012.1 MAG: Magnetococcales bacterium isolate ARS4 MHASMcontig_594833, whole genome shotgun sequence 86,744
NZAD01000013.1 MAG: Magnetococcales bacterium isolate ARS4 MHASMcontig_624480, whole genome shotgun sequence 15,012

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory