fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA974 sp002746975 NORP19

Genome identifier: GCA_002746975.1

NCBI assembly name: ASM274697v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, UA16, UBA974, UBA974 sp002746975

NCBI taxonomy: Bacteria, Bacteroidota

Scaffolds: 14

Genes: 2,049 Protein-coding: 1,992 RNAs: 44 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NVXE01000001.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_42, whole genome shotgun sequence 309,862
NVXE01000002.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_57, whole genome shotgun sequence 283,960
NVXE01000003.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_83, whole genome shotgun sequence 248,146
NVXE01000004.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_102, whole genome shotgun sequence 235,461
NVXE01000005.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_124, whole genome shotgun sequence 220,637
NVXE01000006.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_141, whole genome shotgun sequence 210,753
NVXE01000007.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_182, whole genome shotgun sequence 188,755
NVXE01000008.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_183, whole genome shotgun sequence 188,498
NVXE01000009.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_337, whole genome shotgun sequence 136,555
NVXE01000010.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_447, whole genome shotgun sequence 119,880
NVXE01000011.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_467, whole genome shotgun sequence 117,437
NVXE01000012.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_779, whole genome shotgun sequence 84,903
NVXE01000013.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_2852, whole genome shotgun sequence 32,567
NVXE01000014.1 MAG: Bacteroidetes bacterium isolate NORP19 Contig_source1383C_7903, whole genome shotgun sequence 13,300

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory