fast.genomicscompare 6,575 genera of bacteria & archaea

 

1-14-0-65-60-17 sp002787815 CG12_big_fil_rev_8_21_14_0_65_60_17

Genome identifier: GCA_002787815.1

NCBI assembly name: ASM278781v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Rhodothermales, UBA10348, 1-14-0-65-60-17, 1-14-0-65-60-17 sp002787815

NCBI taxonomy: Bacteria, Bacteroidota

Scaffolds: 90

Genes: 2,574 Protein-coding: 2,466 RNAs: 48 pseudogenes: 60

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PCUY01000001.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_4687_c, whole genome shotgun sequence 7,056
PCUY01000002.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2487_c, whole genome shotgun sequence 10,728
PCUY01000003.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1619_c, whole genome shotgun sequence 14,653
PCUY01000004.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_13265_c, whole genome shotgun sequence 4,072
PCUY01000005.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_920_c, whole genome shotgun sequence 28,635
PCUY01000006.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_4069_c, whole genome shotgun sequence 13,509
PCUY01000007.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2961_c, whole genome shotgun sequence 9,504
PCUY01000008.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_748_c, whole genome shotgun sequence 46,051
PCUY01000009.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1535_c, whole genome shotgun sequence 15,215
PCUY01000010.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1272_c, whole genome shotgun sequence 20,821
PCUY01000011.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_5668_c, whole genome shotgun sequence 8,069
PCUY01000012.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_985_c, whole genome shotgun sequence 21,533
PCUY01000013.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_8184_c, whole genome shotgun sequence 4,909
PCUY01000014.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3170_c, whole genome shotgun sequence 9,058
PCUY01000015.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3867_c, whole genome shotgun sequence 8,208
PCUY01000016.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_67_c, whole genome shotgun sequence 153,801
PCUY01000017.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_126_c, whole genome shotgun sequence 74,864
PCUY01000018.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_206_c, whole genome shotgun sequence 55,825
PCUY01000019.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2857_c, whole genome shotgun sequence 9,629
PCUY01000020.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_941_c, whole genome shotgun sequence 22,292
PCUY01000021.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_5022_c, whole genome shotgun sequence 6,704
PCUY01000022.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2311_c, whole genome shotgun sequence 11,230
PCUY01000023.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3721_c, whole genome shotgun sequence 15,008
PCUY01000024.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1332_c, whole genome shotgun sequence 26,697
PCUY01000025.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_160_c, whole genome shotgun sequence 68,599
PCUY01000026.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_514_c, whole genome shotgun sequence 62,107
PCUY01000027.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2001_c, whole genome shotgun sequence 13,287
PCUY01000028.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_504_c, whole genome shotgun sequence 34,182
PCUY01000029.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3071_c, whole genome shotgun sequence 11,340
PCUY01000030.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_829_c, whole genome shotgun sequence 25,990
PCUY01000031.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_29_c, whole genome shotgun sequence 135,730
PCUY01000032.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2541_c, whole genome shotgun sequence 13,251
PCUY01000033.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1220_c, whole genome shotgun sequence 27,796
PCUY01000034.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1195_c, whole genome shotgun sequence 30,198
PCUY01000035.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_636_c, whole genome shotgun sequence 28,932
PCUY01000036.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_8657_c, whole genome shotgun sequence 4,777
PCUY01000037.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_928_c, whole genome shotgun sequence 23,911
PCUY01000038.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_163_c, whole genome shotgun sequence 63,685
PCUY01000039.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2167_c, whole genome shotgun sequence 11,758
PCUY01000040.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_180_c, whole genome shotgun sequence 60,559
PCUY01000041.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1699_c, whole genome shotgun sequence 14,221
PCUY01000042.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1103_c, whole genome shotgun sequence 19,469
PCUY01000043.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_128_c, whole genome shotgun sequence 168,657
PCUY01000044.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1277_c, whole genome shotgun sequence 17,350
PCUY01000045.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_776_c, whole genome shotgun sequence 25,648
PCUY01000046.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3392_c, whole genome shotgun sequence 8,638
PCUY01000047.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_149_c, whole genome shotgun sequence 99,007
PCUY01000048.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1093_c, whole genome shotgun sequence 31,398
PCUY01000049.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_40759_c, whole genome shotgun sequence 4,759
PCUY01000050.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1087_c, whole genome shotgun sequence 19,705
PCUY01000051.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1295_c, whole genome shotgun sequence 17,092
PCUY01000052.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1613_c, whole genome shotgun sequence 14,693
PCUY01000053.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1497_c, whole genome shotgun sequence 15,434
PCUY01000054.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_9734_c, whole genome shotgun sequence 7,553
PCUY01000055.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1704_c, whole genome shotgun sequence 14,237
PCUY01000056.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_572_c, whole genome shotgun sequence 31,055
PCUY01000057.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_25_c, whole genome shotgun sequence 160,488
PCUY01000058.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3122_c, whole genome shotgun sequence 9,156
PCUY01000059.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_705_c, whole genome shotgun sequence 27,149
PCUY01000060.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_877_c, whole genome shotgun sequence 23,358
PCUY01000061.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1261_c, whole genome shotgun sequence 19,800
PCUY01000062.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_125_c, whole genome shotgun sequence 74,765
PCUY01000063.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2769_c, whole genome shotgun sequence 10,001
PCUY01000064.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_9516_c, whole genome shotgun sequence 4,534
PCUY01000065.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_485_c, whole genome shotgun sequence 34,819
PCUY01000066.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3052_c, whole genome shotgun sequence 9,318
PCUY01000067.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_8498_c, whole genome shotgun sequence 4,788
PCUY01000068.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_498_c, whole genome shotgun sequence 34,329
PCUY01000069.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_10145_c, whole genome shotgun sequence 6,015
PCUY01000070.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_6677_c, whole genome shotgun sequence 5,591
PCUY01000071.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_228_c, whole genome shotgun sequence 83,457
PCUY01000072.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_53_c, whole genome shotgun sequence 142,795
PCUY01000073.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_2963_c, whole genome shotgun sequence 9,532
PCUY01000074.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_369_c, whole genome shotgun sequence 113,215
PCUY01000075.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_85_c, whole genome shotgun sequence 90,962
PCUY01000076.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_185_c, whole genome shotgun sequence 59,936
PCUY01000077.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1161_c, whole genome shotgun sequence 18,967
PCUY01000078.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1201_c, whole genome shotgun sequence 18,104
PCUY01000079.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1302_c, whole genome shotgun sequence 17,094
PCUY01000080.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_6221_c, whole genome shotgun sequence 6,808
PCUY01000081.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_814_c, whole genome shotgun sequence 24,805
PCUY01000082.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_261_c, whole genome shotgun sequence 48,965
PCUY01000083.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_3633_c, whole genome shotgun sequence 15,558
PCUY01000084.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1614_c, whole genome shotgun sequence 14,747
PCUY01000085.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_5156_c, whole genome shotgun sequence 6,674
PCUY01000086.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_4033_c, whole genome shotgun sequence 7,545
PCUY01000087.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_1309_c, whole genome shotgun sequence 17,043
PCUY01000088.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_535_c, whole genome shotgun sequence 42,131
PCUY01000089.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_5003_c, whole genome shotgun sequence 6,794
PCUY01000090.1 MAG: Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 CG12_8_21_14_0.65_scaffold_6338_c, whole genome shotgun sequence 5,773

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory