fast.genomicscompare 6,575 genera of bacteria & archaea

 

1-14-0-20-42-23 sp002796345 CG11_big_fil_rev_8_21_14_0_20_42_23

Genome identifier: GCA_002796345.1

NCBI assembly name: ASM279634v1

GTDB taxonomy: Bacteria, UBA10199, UBA10199, 2-02-FULL-44-16, 2-02-FULL-44-16, 1-14-0-20-42-23, 1-14-0-20-42-23 sp002796345

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 81

Genes: 1,938 Protein-coding: 1,873 RNAs: 40 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PCXC01000001.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_8485_c, whole genome shotgun sequence 6,507
PCXC01000002.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_7911_c, whole genome shotgun sequence 6,810
PCXC01000003.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1563_c, whole genome shotgun sequence 19,534
PCXC01000004.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_353_c, whole genome shotgun sequence 44,180
PCXC01000005.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1521_c, whole genome shotgun sequence 19,776
PCXC01000006.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6101_c, whole genome shotgun sequence 8,113
PCXC01000007.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_280_c, whole genome shotgun sequence 156,858
PCXC01000008.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3663_c, whole genome shotgun sequence 11,226
PCXC01000009.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2042_c, whole genome shotgun sequence 16,562
PCXC01000010.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2486_c, whole genome shotgun sequence 14,569
PCXC01000011.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_287_c, whole genome shotgun sequence 48,141
PCXC01000012.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_14101_c, whole genome shotgun sequence 4,636
PCXC01000013.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3224_c, whole genome shotgun sequence 12,244
PCXC01000014.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1417_c, whole genome shotgun sequence 21,959
PCXC01000015.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1422_c, whole genome shotgun sequence 20,586
PCXC01000016.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3986_c, whole genome shotgun sequence 10,670
PCXC01000017.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_238_c, whole genome shotgun sequence 51,780
PCXC01000018.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_638_c, whole genome shotgun sequence 32,181
PCXC01000019.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6673_c, whole genome shotgun sequence 7,902
PCXC01000020.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_5417_c, whole genome shotgun sequence 8,794
PCXC01000021.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6223_c, whole genome shotgun sequence 8,009
PCXC01000022.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_5622_c, whole genome shotgun sequence 8,565
PCXC01000023.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2710_c, whole genome shotgun sequence 13,748
PCXC01000024.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2477_c, whole genome shotgun sequence 15,815
PCXC01000025.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6721_c, whole genome shotgun sequence 7,642
PCXC01000026.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_16941_c, whole genome shotgun sequence 4,095
PCXC01000027.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_4391_c, whole genome shotgun sequence 10,045
PCXC01000028.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_200_c, whole genome shotgun sequence 115,831
PCXC01000029.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_398_c, whole genome shotgun sequence 41,812
PCXC01000030.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1500_c, whole genome shotgun sequence 19,916
PCXC01000031.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_4993_c, whole genome shotgun sequence 9,290
PCXC01000032.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_483_c, whole genome shotgun sequence 37,517
PCXC01000033.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_17866_c, whole genome shotgun sequence 3,989
PCXC01000034.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_760_c, whole genome shotgun sequence 29,487
PCXC01000035.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1688_c, whole genome shotgun sequence 18,613
PCXC01000036.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_4484_c, whole genome shotgun sequence 9,936
PCXC01000037.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_113_c, whole genome shotgun sequence 147,970
PCXC01000038.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_222_c, whole genome shotgun sequence 52,564
PCXC01000039.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_163_c, whole genome shotgun sequence 68,771
PCXC01000040.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2527_c, whole genome shotgun sequence 14,405
PCXC01000041.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_5069_c, whole genome shotgun sequence 9,191
PCXC01000042.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_577_c, whole genome shotgun sequence 34,029
PCXC01000043.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_7481_c, whole genome shotgun sequence 7,089
PCXC01000044.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_7847_c, whole genome shotgun sequence 6,877
PCXC01000045.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_10817_c, whole genome shotgun sequence 5,477
PCXC01000046.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_747_c, whole genome shotgun sequence 29,749
PCXC01000047.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1009_c, whole genome shotgun sequence 25,238
PCXC01000048.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1410_c, whole genome shotgun sequence 22,152
PCXC01000049.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_15741_c, whole genome shotgun sequence 4,353
PCXC01000050.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2164_c, whole genome shotgun sequence 15,873
PCXC01000051.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_4140_c, whole genome shotgun sequence 16,499
PCXC01000052.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3101_c, whole genome shotgun sequence 12,554
PCXC01000053.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3280_c, whole genome shotgun sequence 12,125
PCXC01000054.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_5523_c, whole genome shotgun sequence 8,663
PCXC01000055.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1656_c, whole genome shotgun sequence 18,823
PCXC01000056.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3767_c, whole genome shotgun sequence 11,057
PCXC01000057.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_533_c, whole genome shotgun sequence 43,276
PCXC01000058.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_5410_c, whole genome shotgun sequence 8,823
PCXC01000059.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2780_c, whole genome shotgun sequence 13,434
PCXC01000060.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_363_c, whole genome shotgun sequence 43,482
PCXC01000061.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6645_c, whole genome shotgun sequence 7,707
PCXC01000062.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_675_c, whole genome shotgun sequence 31,453
PCXC01000063.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_12489_c, whole genome shotgun sequence 5,045
PCXC01000064.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3935_c, whole genome shotgun sequence 10,737
PCXC01000065.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_450_c, whole genome shotgun sequence 38,754
PCXC01000066.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1787_c, whole genome shotgun sequence 32,319
PCXC01000067.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_1510_c, whole genome shotgun sequence 19,866
PCXC01000068.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_550_c, whole genome shotgun sequence 34,674
PCXC01000069.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6634_c, whole genome shotgun sequence 7,670
PCXC01000070.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2786_c, whole genome shotgun sequence 13,436
PCXC01000071.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_960_c, whole genome shotgun sequence 26,044
PCXC01000072.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_8968_c, whole genome shotgun sequence 6,271
PCXC01000073.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_36706_c, whole genome shotgun sequence 4,381
PCXC01000074.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_587_c, whole genome shotgun sequence 34,129
PCXC01000075.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_3574_c, whole genome shotgun sequence 15,307
PCXC01000076.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_215_c, whole genome shotgun sequence 54,003
PCXC01000077.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_6234_c, whole genome shotgun sequence 7,982
PCXC01000078.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_784_c, whole genome shotgun sequence 29,019
PCXC01000079.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_13631_c, whole genome shotgun sequence 4,743
PCXC01000080.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_2169_c, whole genome shotgun sequence 15,858
PCXC01000081.1 MAG: Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 CG11_8_21_14_0.20_scaffold_31_c, whole genome shotgun sequence 120,868

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory