fast.genomicscompare 6,575 genera of bacteria & archaea

 

PGYV01 sp002839855 HGW-Goldbacteria-1

Genome identifier: GCA_002839855.1

NCBI assembly name: ASM283985v1

GTDB taxonomy: Bacteria, Goldbacteria, PGYV01, PGYV01, PGYV01, PGYV01, PGYV01 sp002839855

NCBI taxonomy: Bacteria, Candidatus Goldbacteria

Scaffolds: 18

Genes: 2,546 Protein-coding: 2,484 RNAs: 51 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PGYV01000001.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_51, whole genome shotgun sequence 349,091
PGYV01000002.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_68, whole genome shotgun sequence 343,569
PGYV01000003.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_102, whole genome shotgun sequence 160,449
PGYV01000004.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_104, whole genome shotgun sequence 466,167
PGYV01000005.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_110, whole genome shotgun sequence 307,799
PGYV01000006.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_149, whole genome shotgun sequence 179,810
PGYV01000007.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_168, whole genome shotgun sequence 263,036
PGYV01000008.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_175, whole genome shotgun sequence 201,974
PGYV01000009.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_383, whole genome shotgun sequence 74,186
PGYV01000010.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_429, whole genome shotgun sequence 84,303
PGYV01000011.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_546, whole genome shotgun sequence 67,298
PGYV01000012.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_726, whole genome shotgun sequence 91,647
PGYV01000013.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_915, whole genome shotgun sequence 37,545
PGYV01000014.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_955, whole genome shotgun sequence 46,012
PGYV01000015.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_982, whole genome shotgun sequence 94,881
PGYV01000016.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_1213, whole genome shotgun sequence 54,077
PGYV01000017.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_1439, whole genome shotgun sequence 25,482
PGYV01000018.1 MAG: Candidatus Goldiibacteriota bacterium HGW-Goldbacteria-1 08E140C01_z5_2013_Ig3399_v2_scaffold_2596, whole genome shotgun sequence 15,316

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory