fast.genomicscompare 6,575 genera of bacteria & archaea

 

PHAA01 sp002840245 HGW-Firmicutes-15

Genome identifier: GCA_002840245.1

NCBI assembly name: ASM284024v1

GTDB taxonomy: Bacteria, Bacillota_B, Syntrophomonadia, Syntrophomonadales, Syntrophomonadaceae, PHAA01, PHAA01 sp002840245

NCBI taxonomy: Bacteria, Bacillota

Scaffolds: 84

Genes: 3,264 Protein-coding: 3,154 RNAs: 54 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PHAA01000001.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_87, whole genome shotgun sequence 150,933
PHAA01000002.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_97, whole genome shotgun sequence 140,750
PHAA01000003.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_104, whole genome shotgun sequence 141,528
PHAA01000004.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_105, whole genome shotgun sequence 133,496
PHAA01000005.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_117, whole genome shotgun sequence 123,783
PHAA01000006.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_119, whole genome shotgun sequence 122,677
PHAA01000007.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_139, whole genome shotgun sequence 212,351
PHAA01000008.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_171, whole genome shotgun sequence 101,225
PHAA01000009.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_174, whole genome shotgun sequence 101,148
PHAA01000010.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_185, whole genome shotgun sequence 99,009
PHAA01000011.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_196, whole genome shotgun sequence 151,748
PHAA01000012.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_212, whole genome shotgun sequence 89,572
PHAA01000013.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_225, whole genome shotgun sequence 85,983
PHAA01000014.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_235, whole genome shotgun sequence 83,523
PHAA01000015.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_248, whole genome shotgun sequence 95,859
PHAA01000016.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_265, whole genome shotgun sequence 76,855
PHAA01000017.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_266, whole genome shotgun sequence 76,086
PHAA01000018.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_280, whole genome shotgun sequence 72,447
PHAA01000019.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_287, whole genome shotgun sequence 71,151
PHAA01000020.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_311, whole genome shotgun sequence 63,897
PHAA01000021.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_327, whole genome shotgun sequence 61,132
PHAA01000022.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_333, whole genome shotgun sequence 60,090
PHAA01000023.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_355, whole genome shotgun sequence 57,105
PHAA01000024.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_375, whole genome shotgun sequence 91,134
PHAA01000025.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_387, whole genome shotgun sequence 51,105
PHAA01000026.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_413, whole genome shotgun sequence 117,377
PHAA01000027.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_424, whole genome shotgun sequence 78,215
PHAA01000028.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_472, whole genome shotgun sequence 43,498
PHAA01000029.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_481, whole genome shotgun sequence 42,902
PHAA01000030.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_555, whole genome shotgun sequence 63,599
PHAA01000031.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_604, whole genome shotgun sequence 34,220
PHAA01000032.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_612, whole genome shotgun sequence 33,798
PHAA01000033.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_790, whole genome shotgun sequence 32,150
PHAA01000034.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_793, whole genome shotgun sequence 26,604
PHAA01000035.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_797, whole genome shotgun sequence 26,465
PHAA01000036.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_808, whole genome shotgun sequence 26,103
PHAA01000037.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_887, whole genome shotgun sequence 24,103
PHAA01000038.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_895, whole genome shotgun sequence 23,773
PHAA01000039.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_936, whole genome shotgun sequence 23,696
PHAA01000040.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1030, whole genome shotgun sequence 21,741
PHAA01000041.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1090, whole genome shotgun sequence 31,499
PHAA01000042.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1186, whole genome shotgun sequence 24,731
PHAA01000043.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1188, whole genome shotgun sequence 18,257
PHAA01000044.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1265, whole genome shotgun sequence 17,385
PHAA01000045.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1278, whole genome shotgun sequence 17,244
PHAA01000046.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1289, whole genome shotgun sequence 17,137
PHAA01000047.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1356, whole genome shotgun sequence 16,442
PHAA01000048.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1453, whole genome shotgun sequence 15,441
PHAA01000049.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1790, whole genome shotgun sequence 14,117
PHAA01000050.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_1994, whole genome shotgun sequence 24,661
PHAA01000051.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_2195, whole genome shotgun sequence 10,740
PHAA01000052.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_2349, whole genome shotgun sequence 10,119
PHAA01000053.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_2517, whole genome shotgun sequence 9,511
PHAA01000054.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_2570, whole genome shotgun sequence 9,329
PHAA01000055.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_2851, whole genome shotgun sequence 8,565
PHAA01000056.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_3123, whole genome shotgun sequence 8,608
PHAA01000057.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_3125, whole genome shotgun sequence 7,919
PHAA01000058.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_3476, whole genome shotgun sequence 7,247
PHAA01000059.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_3887, whole genome shotgun sequence 7,362
PHAA01000060.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_6890, whole genome shotgun sequence 4,164
PHAA01000061.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_8981, whole genome shotgun sequence 3,376
PHAA01000062.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_10144, whole genome shotgun sequence 3,073
PHAA01000063.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_10213, whole genome shotgun sequence 3,056
PHAA01000064.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_10995, whole genome shotgun sequence 2,882
PHAA01000065.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_12720, whole genome shotgun sequence 2,581
PHAA01000066.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_13091, whole genome shotgun sequence 2,528
PHAA01000067.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_13271, whole genome shotgun sequence 2,502
PHAA01000068.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_13496, whole genome shotgun sequence 2,472
PHAA01000069.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_14153, whole genome shotgun sequence 2,380
PHAA01000070.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_14711, whole genome shotgun sequence 2,307
PHAA01000071.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_16951, whole genome shotgun sequence 4,255
PHAA01000072.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_17923, whole genome shotgun sequence 1,987
PHAA01000073.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_18497, whole genome shotgun sequence 1,938
PHAA01000074.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_19719, whole genome shotgun sequence 1,842
PHAA01000075.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_19763, whole genome shotgun sequence 1,839
PHAA01000076.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_19777, whole genome shotgun sequence 2,349
PHAA01000077.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_19820, whole genome shotgun sequence 1,835
PHAA01000078.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_24010, whole genome shotgun sequence 1,584
PHAA01000079.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_27638, whole genome shotgun sequence 1,423
PHAA01000080.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_28867, whole genome shotgun sequence 1,374
PHAA01000081.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_32284, whole genome shotgun sequence 1,258
PHAA01000082.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_32901, whole genome shotgun sequence 1,239
PHAA01000083.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_35515, whole genome shotgun sequence 1,165
PHAA01000084.1 MAG: Firmicutes bacterium HGW-Firmicutes-15 bjp_ig2069_scaffold_35650, whole genome shotgun sequence 1,162

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory