fast.genomicscompare 6,575 genera of bacteria & archaea

 

PHAE01 sp002840285 HGW-Firmicutes-11

Genome identifier: GCA_002840285.1

NCBI assembly name: ASM284028v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Anaerovoracaceae, PHAE01, PHAE01 sp002840285

NCBI taxonomy: Bacteria, Bacillota

Scaffolds: 75

Genes: 1,893 Protein-coding: 1,835 RNAs: 52 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PHAE01000001.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_83, whole genome shotgun sequence 124,733
PHAE01000002.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_88, whole genome shotgun sequence 156,303
PHAE01000003.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_105, whole genome shotgun sequence 114,826
PHAE01000004.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_138, whole genome shotgun sequence 96,792
PHAE01000005.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_140, whole genome shotgun sequence 96,101
PHAE01000006.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_201, whole genome shotgun sequence 78,233
PHAE01000007.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_212, whole genome shotgun sequence 74,320
PHAE01000008.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_230, whole genome shotgun sequence 72,902
PHAE01000009.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_258, whole genome shotgun sequence 66,175
PHAE01000010.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_282, whole genome shotgun sequence 62,866
PHAE01000011.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_293, whole genome shotgun sequence 60,641
PHAE01000012.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_330, whole genome shotgun sequence 56,524
PHAE01000013.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_332, whole genome shotgun sequence 56,454
PHAE01000014.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_334, whole genome shotgun sequence 56,388
PHAE01000015.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_441, whole genome shotgun sequence 73,103
PHAE01000016.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_448, whole genome shotgun sequence 46,815
PHAE01000017.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_525, whole genome shotgun sequence 40,871
PHAE01000018.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_889, whole genome shotgun sequence 26,468
PHAE01000019.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_910, whole genome shotgun sequence 25,884
PHAE01000020.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_957, whole genome shotgun sequence 24,785
PHAE01000021.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_985, whole genome shotgun sequence 24,314
PHAE01000022.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1170, whole genome shotgun sequence 21,378
PHAE01000023.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1177, whole genome shotgun sequence 21,223
PHAE01000024.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1181, whole genome shotgun sequence 21,156
PHAE01000025.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1211, whole genome shotgun sequence 20,723
PHAE01000026.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1285, whole genome shotgun sequence 19,646
PHAE01000027.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1496, whole genome shotgun sequence 17,221
PHAE01000028.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1522, whole genome shotgun sequence 16,927
PHAE01000029.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1824, whole genome shotgun sequence 14,713
PHAE01000030.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_1833, whole genome shotgun sequence 14,677
PHAE01000031.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2094, whole genome shotgun sequence 13,091
PHAE01000032.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2106, whole genome shotgun sequence 13,012
PHAE01000033.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2109, whole genome shotgun sequence 12,973
PHAE01000034.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2110, whole genome shotgun sequence 12,969
PHAE01000035.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2144, whole genome shotgun sequence 12,775
PHAE01000036.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2145, whole genome shotgun sequence 21,298
PHAE01000037.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2247, whole genome shotgun sequence 16,347
PHAE01000038.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2451, whole genome shotgun sequence 11,366
PHAE01000039.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2534, whole genome shotgun sequence 11,007
PHAE01000040.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2558, whole genome shotgun sequence 10,931
PHAE01000041.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_2822, whole genome shotgun sequence 9,963
PHAE01000042.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3037, whole genome shotgun sequence 9,376
PHAE01000043.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3248, whole genome shotgun sequence 8,778
PHAE01000044.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3294, whole genome shotgun sequence 8,677
PHAE01000045.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3351, whole genome shotgun sequence 8,542
PHAE01000046.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3475, whole genome shotgun sequence 8,307
PHAE01000047.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_3554, whole genome shotgun sequence 8,141
PHAE01000048.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4280, whole genome shotgun sequence 7,018
PHAE01000049.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4327, whole genome shotgun sequence 6,935
PHAE01000050.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4461, whole genome shotgun sequence 6,767
PHAE01000051.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4508, whole genome shotgun sequence 6,708
PHAE01000052.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4656, whole genome shotgun sequence 11,370
PHAE01000053.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4678, whole genome shotgun sequence 6,476
PHAE01000054.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4731, whole genome shotgun sequence 6,411
PHAE01000055.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_4909, whole genome shotgun sequence 6,209
PHAE01000056.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_5602, whole genome shotgun sequence 5,564
PHAE01000057.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_6076, whole genome shotgun sequence 10,266
PHAE01000058.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_6126, whole genome shotgun sequence 5,155
PHAE01000059.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_6676, whole genome shotgun sequence 4,807
PHAE01000060.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_7987, whole genome shotgun sequence 4,125
PHAE01000061.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_8535, whole genome shotgun sequence 3,900
PHAE01000062.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_9773, whole genome shotgun sequence 3,490
PHAE01000063.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_9929, whole genome shotgun sequence 3,441
PHAE01000064.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_10371, whole genome shotgun sequence 3,325
PHAE01000065.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_10803, whole genome shotgun sequence 3,212
PHAE01000066.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_11031, whole genome shotgun sequence 3,158
PHAE01000067.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_13954, whole genome shotgun sequence 2,578
PHAE01000068.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_14992, whole genome shotgun sequence 2,419
PHAE01000069.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_15050, whole genome shotgun sequence 2,409
PHAE01000070.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_16032, whole genome shotgun sequence 2,284
PHAE01000071.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_16813, whole genome shotgun sequence 2,192
PHAE01000072.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_16835, whole genome shotgun sequence 2,190
PHAE01000073.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_17239, whole genome shotgun sequence 2,144
PHAE01000074.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_17391, whole genome shotgun sequence 2,131
PHAE01000075.1 MAG: Firmicutes bacterium HGW-Firmicutes-11 bjp_ig2103_scaffold_17626, whole genome shotgun sequence 2,104

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory