fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA2658 sp002841545 HGW-Firmicutes-16

Genome identifier: GCA_002841545.1

NCBI assembly name: ASM284154v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Oscillospiraceae, UBA2658, UBA2658 sp002841545

NCBI taxonomy: Bacteria, Bacillota

Scaffolds: 22

Genes: 2,707 Protein-coding: 2,617 RNAs: 56 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PGZZ01000001.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_32, whole genome shotgun sequence 261,395
PGZZ01000002.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_55, whole genome shotgun sequence 588,911
PGZZ01000003.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_57, whole genome shotgun sequence 189,762
PGZZ01000004.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_60, whole genome shotgun sequence 186,762
PGZZ01000005.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_68, whole genome shotgun sequence 202,978
PGZZ01000006.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_83, whole genome shotgun sequence 327,583
PGZZ01000007.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_91, whole genome shotgun sequence 250,455
PGZZ01000008.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_124, whole genome shotgun sequence 121,403
PGZZ01000009.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_161, whole genome shotgun sequence 143,725
PGZZ01000010.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_236, whole genome shotgun sequence 85,536
PGZZ01000011.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_270, whole genome shotgun sequence 75,444
PGZZ01000012.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_396, whole genome shotgun sequence 94,230
PGZZ01000013.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_419, whole genome shotgun sequence 49,095
PGZZ01000014.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_436, whole genome shotgun sequence 63,404
PGZZ01000015.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_527, whole genome shotgun sequence 38,887
PGZZ01000016.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_764, whole genome shotgun sequence 27,544
PGZZ01000017.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_957, whole genome shotgun sequence 23,840
PGZZ01000018.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_1055, whole genome shotgun sequence 20,452
PGZZ01000019.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_1640, whole genome shotgun sequence 13,974
PGZZ01000020.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_1706, whole genome shotgun sequence 13,426
PGZZ01000021.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_1736, whole genome shotgun sequence 13,270
PGZZ01000022.1 MAG: Firmicutes bacterium HGW-Firmicutes-16 bjp_ig2069_scaffold_31921, whole genome shotgun sequence 1,269

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory