fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA2197 sp002841765 HGW-Deltaproteobacteria-4

Genome identifier: GCA_002841765.1

NCBI assembly name: ASM284176v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, UBA2197, UBA2197, UBA2197 sp002841765

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 30

Genes: 2,750 Protein-coding: 2,662 RNAs: 54 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PHAV01000001.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_7, whole genome shotgun sequence 296,606
PHAV01000002.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_8, whole genome shotgun sequence 272,072
PHAV01000003.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_27, whole genome shotgun sequence 189,985
PHAV01000004.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_30, whole genome shotgun sequence 184,586
PHAV01000005.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_36, whole genome shotgun sequence 168,465
PHAV01000006.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_46, whole genome shotgun sequence 226,050
PHAV01000007.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_49, whole genome shotgun sequence 143,032
PHAV01000008.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_51, whole genome shotgun sequence 137,704
PHAV01000009.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_54, whole genome shotgun sequence 206,968
PHAV01000010.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_55, whole genome shotgun sequence 132,758
PHAV01000011.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_82, whole genome shotgun sequence 156,797
PHAV01000012.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_104, whole genome shotgun sequence 82,170
PHAV01000013.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_125, whole genome shotgun sequence 73,850
PHAV01000014.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_129, whole genome shotgun sequence 75,635
PHAV01000015.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_136, whole genome shotgun sequence 73,390
PHAV01000016.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_145, whole genome shotgun sequence 139,708
PHAV01000017.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_157, whole genome shotgun sequence 62,864
PHAV01000018.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_182, whole genome shotgun sequence 54,812
PHAV01000019.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_193, whole genome shotgun sequence 52,234
PHAV01000020.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_237, whole genome shotgun sequence 44,446
PHAV01000021.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_245, whole genome shotgun sequence 43,279
PHAV01000022.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_269, whole genome shotgun sequence 40,892
PHAV01000023.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_277, whole genome shotgun sequence 45,781
PHAV01000024.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_419, whole genome shotgun sequence 27,166
PHAV01000025.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_456, whole genome shotgun sequence 25,260
PHAV01000026.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_580, whole genome shotgun sequence 20,076
PHAV01000027.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_659, whole genome shotgun sequence 17,476
PHAV01000028.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_766, whole genome shotgun sequence 15,275
PHAV01000029.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_2281, whole genome shotgun sequence 8,317
PHAV01000030.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4 bjp_ig2157_scaffold_5196, whole genome shotgun sequence 4,196

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory