fast.genomicscompare 6,575 genera of bacteria & archaea

 

PHBD01 sp002841865 HGW-Deltaproteobacteria-19

Genome identifier: GCA_002841865.1

NCBI assembly name: ASM284186v1

GTDB taxonomy: Bacteria, Desulfobacterota, Syntrophia, Syntrophales, PHBD01, PHBD01, PHBD01 sp002841865

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 87

Genes: 3,607 Protein-coding: 3,509 RNAs: 57 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
PHBD01000001.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_25, whole genome shotgun sequence 289,284
PHBD01000002.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_113, whole genome shotgun sequence 134,710
PHBD01000003.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_135, whole genome shotgun sequence 226,496
PHBD01000004.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_136, whole genome shotgun sequence 124,433
PHBD01000005.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_137, whole genome shotgun sequence 147,019
PHBD01000006.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_189, whole genome shotgun sequence 189,503
PHBD01000007.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_198, whole genome shotgun sequence 147,985
PHBD01000008.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_201, whole genome shotgun sequence 215,310
PHBD01000009.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_207, whole genome shotgun sequence 147,760
PHBD01000010.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_215, whole genome shotgun sequence 94,853
PHBD01000011.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_223, whole genome shotgun sequence 221,772
PHBD01000012.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_248, whole genome shotgun sequence 161,693
PHBD01000013.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_317, whole genome shotgun sequence 72,584
PHBD01000014.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_332, whole genome shotgun sequence 117,722
PHBD01000015.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_351, whole genome shotgun sequence 66,807
PHBD01000016.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_370, whole genome shotgun sequence 89,018
PHBD01000017.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_382, whole genome shotgun sequence 62,132
PHBD01000018.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_413, whole genome shotgun sequence 141,764
PHBD01000019.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_432, whole genome shotgun sequence 57,218
PHBD01000020.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_455, whole genome shotgun sequence 55,216
PHBD01000021.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_458, whole genome shotgun sequence 96,561
PHBD01000022.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_527, whole genome shotgun sequence 51,882
PHBD01000023.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_554, whole genome shotgun sequence 48,591
PHBD01000024.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_557, whole genome shotgun sequence 67,206
PHBD01000025.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_562, whole genome shotgun sequence 68,208
PHBD01000026.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_620, whole genome shotgun sequence 44,459
PHBD01000027.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_689, whole genome shotgun sequence 69,562
PHBD01000028.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_754, whole genome shotgun sequence 45,574
PHBD01000029.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_759, whole genome shotgun sequence 37,681
PHBD01000030.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_801, whole genome shotgun sequence 36,066
PHBD01000031.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_865, whole genome shotgun sequence 33,712
PHBD01000032.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_871, whole genome shotgun sequence 65,787
PHBD01000033.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_872, whole genome shotgun sequence 45,693
PHBD01000034.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_949, whole genome shotgun sequence 31,236
PHBD01000035.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_988, whole genome shotgun sequence 42,200
PHBD01000036.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1295, whole genome shotgun sequence 23,623
PHBD01000037.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1319, whole genome shotgun sequence 23,203
PHBD01000038.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1510, whole genome shotgun sequence 20,910
PHBD01000039.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1525, whole genome shotgun sequence 20,756
PHBD01000040.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1663, whole genome shotgun sequence 19,260
PHBD01000041.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1711, whole genome shotgun sequence 25,771
PHBD01000042.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1762, whole genome shotgun sequence 18,261
PHBD01000043.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1853, whole genome shotgun sequence 17,305
PHBD01000044.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1915, whole genome shotgun sequence 16,862
PHBD01000045.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_1932, whole genome shotgun sequence 16,701
PHBD01000046.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_2175, whole genome shotgun sequence 30,696
PHBD01000047.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_2240, whole genome shotgun sequence 14,567
PHBD01000048.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_2553, whole genome shotgun sequence 12,854
PHBD01000049.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_2964, whole genome shotgun sequence 11,172
PHBD01000050.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3040, whole genome shotgun sequence 10,889
PHBD01000051.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3229, whole genome shotgun sequence 10,247
PHBD01000052.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3429, whole genome shotgun sequence 11,263
PHBD01000053.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3653, whole genome shotgun sequence 9,777
PHBD01000054.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3858, whole genome shotgun sequence 8,608
PHBD01000055.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_3966, whole genome shotgun sequence 8,335
PHBD01000056.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_4087, whole genome shotgun sequence 8,126
PHBD01000057.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_4150, whole genome shotgun sequence 8,014
PHBD01000058.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_4806, whole genome shotgun sequence 6,922
PHBD01000059.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_5394, whole genome shotgun sequence 6,152
PHBD01000060.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_5478, whole genome shotgun sequence 9,677
PHBD01000061.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_6898, whole genome shotgun sequence 4,902
PHBD01000062.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_7585, whole genome shotgun sequence 4,521
PHBD01000063.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_8013, whole genome shotgun sequence 4,302
PHBD01000064.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_8818, whole genome shotgun sequence 3,948
PHBD01000065.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_9239, whole genome shotgun sequence 3,796
PHBD01000066.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_9324, whole genome shotgun sequence 3,767
PHBD01000067.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_10678, whole genome shotgun sequence 3,363
PHBD01000068.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_11809, whole genome shotgun sequence 3,097
PHBD01000069.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_12744, whole genome shotgun sequence 2,902
PHBD01000070.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_12811, whole genome shotgun sequence 2,892
PHBD01000071.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_13754, whole genome shotgun sequence 2,728
PHBD01000072.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_19137, whole genome shotgun sequence 2,070
PHBD01000073.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_19217, whole genome shotgun sequence 2,063
PHBD01000074.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_19375, whole genome shotgun sequence 2,048
PHBD01000075.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_19493, whole genome shotgun sequence 2,039
PHBD01000076.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_20352, whole genome shotgun sequence 1,967
PHBD01000077.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_23169, whole genome shotgun sequence 1,768
PHBD01000078.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_26379, whole genome shotgun sequence 1,587
PHBD01000079.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_27215, whole genome shotgun sequence 1,546
PHBD01000080.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_27708, whole genome shotgun sequence 1,522
PHBD01000081.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_29588, whole genome shotgun sequence 1,441
PHBD01000082.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_32481, whole genome shotgun sequence 1,335
PHBD01000083.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_38747, whole genome shotgun sequence 1,149
PHBD01000084.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_40653, whole genome shotgun sequence 1,102
PHBD01000085.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_40792, whole genome shotgun sequence 1,099
PHBD01000086.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_41894, whole genome shotgun sequence 1,074
PHBD01000087.1 MAG: Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19 bjp_ig2102_scaffold_43857, whole genome shotgun sequence 1,032

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory