fast.genomicscompare 6,575 genera of bacteria & archaea

 

HRBIN01 sp002898355 HRbin01

Genome identifier: GCA_002898355.1

NCBI assembly name: ASM289835v1

GTDB taxonomy: Archaea, Thermoproteota, Nitrososphaeria_A, Caldarchaeales, Caldarchaeaceae, HRBIN01, HRBIN01 sp002898355

NCBI taxonomy: Archaea

Scaffolds: 32

Genes: 1,947 Protein-coding: 1,916 RNAs: 31 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
BEHD01000001.1 Archaeon HR01 DNA, contig: NODE_34_1, isolate: HRbin01, whole genome shotgun sequence 180,679
BEHD01000002.1 Archaeon HR01 DNA, contig: NODE_61_2, isolate: HRbin01, whole genome shotgun sequence 128,944
BEHD01000003.1 Archaeon HR01 DNA, contig: NODE_74_3, isolate: HRbin01, whole genome shotgun sequence 118,802
BEHD01000004.1 Archaeon HR01 DNA, contig: NODE_75_4, isolate: HRbin01, whole genome shotgun sequence 116,730
BEHD01000005.1 Archaeon HR01 DNA, contig: NODE_78_5, isolate: HRbin01, whole genome shotgun sequence 115,861
BEHD01000006.1 Archaeon HR01 DNA, contig: NODE_86_6, isolate: HRbin01, whole genome shotgun sequence 106,822
BEHD01000007.1 Archaeon HR01 DNA, contig: NODE_89_7, isolate: HRbin01, whole genome shotgun sequence 104,367
BEHD01000008.1 Archaeon HR01 DNA, contig: NODE_101_8, isolate: HRbin01, whole genome shotgun sequence 96,642
BEHD01000009.1 Archaeon HR01 DNA, contig: NODE_116_9, isolate: HRbin01, whole genome shotgun sequence 85,267
BEHD01000010.1 Archaeon HR01 DNA, contig: NODE_144_10, isolate: HRbin01, whole genome shotgun sequence 78,443
BEHD01000011.1 Archaeon HR01 DNA, contig: NODE_164_11, isolate: HRbin01, whole genome shotgun sequence 72,526
BEHD01000012.1 Archaeon HR01 DNA, contig: NODE_168_12, isolate: HRbin01, whole genome shotgun sequence 71,981
BEHD01000013.1 Archaeon HR01 DNA, contig: NODE_194_13, isolate: HRbin01, whole genome shotgun sequence 63,423
BEHD01000014.1 Archaeon HR01 DNA, contig: NODE_207_14, isolate: HRbin01, whole genome shotgun sequence 61,160
BEHD01000015.1 Archaeon HR01 DNA, contig: NODE_260_15, isolate: HRbin01, whole genome shotgun sequence 51,149
BEHD01000016.1 Archaeon HR01 DNA, contig: NODE_284_16, isolate: HRbin01, whole genome shotgun sequence 47,985
BEHD01000017.1 Archaeon HR01 DNA, contig: NODE_323_17, isolate: HRbin01, whole genome shotgun sequence 42,906
BEHD01000018.1 Archaeon HR01 DNA, contig: NODE_473_18, isolate: HRbin01, whole genome shotgun sequence 31,083
BEHD01000019.1 Archaeon HR01 DNA, contig: NODE_610_19, isolate: HRbin01, whole genome shotgun sequence 25,206
BEHD01000020.1 Archaeon HR01 DNA, contig: NODE_623_20, isolate: HRbin01, whole genome shotgun sequence 24,760
BEHD01000021.1 Archaeon HR01 DNA, contig: NODE_626_21, isolate: HRbin01, whole genome shotgun sequence 24,670
BEHD01000022.1 Archaeon HR01 DNA, contig: NODE_672_22, isolate: HRbin01, whole genome shotgun sequence 23,392
BEHD01000023.1 Archaeon HR01 DNA, contig: NODE_985_23, isolate: HRbin01, whole genome shotgun sequence 16,723
BEHD01000024.1 Archaeon HR01 DNA, contig: NODE_1242_24, isolate: HRbin01, whole genome shotgun sequence 14,016
BEHD01000025.1 Archaeon HR01 DNA, contig: NODE_1738_25, isolate: HRbin01, whole genome shotgun sequence 10,990
BEHD01000026.1 Archaeon HR01 DNA, contig: NODE_1864_26, isolate: HRbin01, whole genome shotgun sequence 10,451
BEHD01000027.1 Archaeon HR01 DNA, contig: NODE_2832_27, isolate: HRbin01, whole genome shotgun sequence 7,836
BEHD01000028.1 Archaeon HR01 DNA, contig: NODE_3323_28, isolate: HRbin01, whole genome shotgun sequence 6,979
BEHD01000029.1 Archaeon HR01 DNA, contig: NODE_3505_29, isolate: HRbin01, whole genome shotgun sequence 6,681
BEHD01000030.1 Archaeon HR01 DNA, contig: NODE_4326_30, isolate: HRbin01, whole genome shotgun sequence 5,645
BEHD01000031.1 Archaeon HR01 DNA, contig: NODE_4937_31, isolate: HRbin01, whole genome shotgun sequence 5,063
BEHD01000032.1 Archaeon HR01 DNA, contig: NODE_6448_32, isolate: HRbin01, whole genome shotgun sequence 4,003

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory