fast.genomicscompare 6,575 genera of bacteria & archaea

 

LW23 sp003054695 LW23

Genome identifier: GCA_003054695.1

NCBI assembly name: ASM305469v1

GTDB taxonomy: Bacteria, Verrucomicrobiota, Verrucomicrobiae, Methylacidiphilales, UBA1321, LW23, LW23 sp003054695

NCBI taxonomy: Bacteria, Verrucomicrobiota

Scaffolds: 56

Genes: 5,042 Protein-coding: 4,879 RNAs: 61 pseudogenes: 102

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
QAZA01000001.1 Verrucomicrobia bacterium LW23 LW23_contig_1, whole genome shotgun sequence 225,091
QAZA01000002.1 Verrucomicrobia bacterium LW23 LW23_contig_10, whole genome shotgun sequence 58,029
QAZA01000003.1 Verrucomicrobia bacterium LW23 LW23_contig_11, whole genome shotgun sequence 167,919
QAZA01000004.1 Verrucomicrobia bacterium LW23 LW23_contig_12, whole genome shotgun sequence 2,457
QAZA01000005.1 Verrucomicrobia bacterium LW23 LW23_contig_13, whole genome shotgun sequence 136,108
QAZA01000006.1 Verrucomicrobia bacterium LW23 LW23_contig_14, whole genome shotgun sequence 3,531
QAZA01000007.1 Verrucomicrobia bacterium LW23 LW23_contig_15, whole genome shotgun sequence 72,137
QAZA01000008.1 Verrucomicrobia bacterium LW23 LW23_contig_16, whole genome shotgun sequence 18,620
QAZA01000009.1 Verrucomicrobia bacterium LW23 LW23_contig_17, whole genome shotgun sequence 262,065
QAZA01000010.1 Verrucomicrobia bacterium LW23 LW23_contig_18, whole genome shotgun sequence 410,963
QAZA01000011.1 Verrucomicrobia bacterium LW23 LW23_contig_19, whole genome shotgun sequence 476,615
QAZA01000012.1 Verrucomicrobia bacterium LW23 LW23_contig_2, whole genome shotgun sequence 126,620
QAZA01000013.1 Verrucomicrobia bacterium LW23 LW23_contig_20, whole genome shotgun sequence 33,996
QAZA01000014.1 Verrucomicrobia bacterium LW23 LW23_contig_21, whole genome shotgun sequence 105,480
QAZA01000015.1 Verrucomicrobia bacterium LW23 LW23_contig_22, whole genome shotgun sequence 53,517
QAZA01000016.1 Verrucomicrobia bacterium LW23 LW23_contig_25, whole genome shotgun sequence 147,282
QAZA01000017.1 Verrucomicrobia bacterium LW23 LW23_contig_26, whole genome shotgun sequence 281,881
QAZA01000018.1 Verrucomicrobia bacterium LW23 LW23_contig_27, whole genome shotgun sequence 42,735
QAZA01000019.1 Verrucomicrobia bacterium LW23 LW23_contig_28, whole genome shotgun sequence 50,640
QAZA01000020.1 Verrucomicrobia bacterium LW23 LW23_contig_29, whole genome shotgun sequence 56,488
QAZA01000021.1 Verrucomicrobia bacterium LW23 LW23_contig_3, whole genome shotgun sequence 140,358
QAZA01000022.1 Verrucomicrobia bacterium LW23 LW23_contig_30, whole genome shotgun sequence 13,031
QAZA01000023.1 Verrucomicrobia bacterium LW23 LW23_contig_31, whole genome shotgun sequence 144,544
QAZA01000024.1 Verrucomicrobia bacterium LW23 LW23_contig_32, whole genome shotgun sequence 78,321
QAZA01000025.1 Verrucomicrobia bacterium LW23 LW23_contig_34, whole genome shotgun sequence 331,954
QAZA01000026.1 Verrucomicrobia bacterium LW23 LW23_contig_35, whole genome shotgun sequence 11,996
QAZA01000027.1 Verrucomicrobia bacterium LW23 LW23_contig_36, whole genome shotgun sequence 1,671
QAZA01000028.1 Verrucomicrobia bacterium LW23 LW23_contig_38, whole genome shotgun sequence 31,043
QAZA01000029.1 Verrucomicrobia bacterium LW23 LW23_contig_39, whole genome shotgun sequence 4,497
QAZA01000030.1 Verrucomicrobia bacterium LW23 LW23_contig_4, whole genome shotgun sequence 83,026
QAZA01000031.1 Verrucomicrobia bacterium LW23 LW23_contig_40, whole genome shotgun sequence 6,778
QAZA01000032.1 Verrucomicrobia bacterium LW23 LW23_contig_41, whole genome shotgun sequence 6,332
QAZA01000033.1 Verrucomicrobia bacterium LW23 LW23_contig_42, whole genome shotgun sequence 1,207
QAZA01000034.1 Verrucomicrobia bacterium LW23 LW23_contig_43, whole genome shotgun sequence 30,183
QAZA01000035.1 Verrucomicrobia bacterium LW23 LW23_contig_44, whole genome shotgun sequence 3,527
QAZA01000036.1 Verrucomicrobia bacterium LW23 LW23_contig_45, whole genome shotgun sequence 2,057
QAZA01000037.1 Verrucomicrobia bacterium LW23 LW23_contig_46, whole genome shotgun sequence 5,822
QAZA01000038.1 Verrucomicrobia bacterium LW23 LW23_contig_48, whole genome shotgun sequence 25,899
QAZA01000039.1 Verrucomicrobia bacterium LW23 LW23_contig_5, whole genome shotgun sequence 469,925
QAZA01000040.1 Verrucomicrobia bacterium LW23 LW23_contig_51, whole genome shotgun sequence 1,681
QAZA01000041.1 Verrucomicrobia bacterium LW23 LW23_contig_55, whole genome shotgun sequence 7,753
QAZA01000042.1 Verrucomicrobia bacterium LW23 LW23_contig_56, whole genome shotgun sequence 18,443
QAZA01000043.1 Verrucomicrobia bacterium LW23 LW23_contig_57, whole genome shotgun sequence 3,189
QAZA01000044.1 Verrucomicrobia bacterium LW23 LW23_contig_58, whole genome shotgun sequence 2,846
QAZA01000045.1 Verrucomicrobia bacterium LW23 LW23_contig_6, whole genome shotgun sequence 1,012,735
QAZA01000046.1 Verrucomicrobia bacterium LW23 LW23_contig_61, whole genome shotgun sequence 1,294
QAZA01000047.1 Verrucomicrobia bacterium LW23 LW23_contig_62, whole genome shotgun sequence 3,544
QAZA01000048.1 Verrucomicrobia bacterium LW23 LW23_contig_63, whole genome shotgun sequence 1,981
QAZA01000049.1 Verrucomicrobia bacterium LW23 LW23_contig_65, whole genome shotgun sequence 1,088
QAZA01000050.1 Verrucomicrobia bacterium LW23 LW23_contig_7, whole genome shotgun sequence 604,132
QAZA01000051.1 Verrucomicrobia bacterium LW23 LW23_contig_72, whole genome shotgun sequence 2,113
QAZA01000052.1 Verrucomicrobia bacterium LW23 LW23_contig_76, whole genome shotgun sequence 1,001
QAZA01000053.1 Verrucomicrobia bacterium LW23 LW23_contig_8, whole genome shotgun sequence 232,223
QAZA01000054.1 Verrucomicrobia bacterium LW23 LW23_contig_81, whole genome shotgun sequence 1,970
QAZA01000055.1 Verrucomicrobia bacterium LW23 LW23_contig_9a_Average_coverage:_47.14, whole genome shotgun sequence 42,126
QAZA01000056.1 Verrucomicrobia bacterium LW23 LW23_contig_9b_Average_coverage:_46.71, whole genome shotgun sequence 551,645

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory