fast.genomicscompare 6,575 genera of bacteria & archaea

 

AG1 sp003116855 AG1

Genome identifier: GCA_003116855.1

NCBI assembly name: ASM311685v1

GTDB taxonomy: Archaea, Thermoproteota, Thermoprotei_A, Sulfolobales, AG1, AG1, AG1 sp003116855

NCBI taxonomy: Archaea, Thermoproteota, Thermoprotei, Desulfurococcales, Desulfurococcaceae

Scaffolds: 28

Genes: 1,948 Protein-coding: 1,904 RNAs: 44 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
BEWT01000001.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig01, whole genome shotgun sequence 163,168
BEWT01000002.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig02, whole genome shotgun sequence 80,351
BEWT01000003.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig03, whole genome shotgun sequence 76,471
BEWT01000004.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig04, whole genome shotgun sequence 173,071
BEWT01000005.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig05, whole genome shotgun sequence 179,643
BEWT01000006.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig06, whole genome shotgun sequence 79,781
BEWT01000007.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig07, whole genome shotgun sequence 24,937
BEWT01000008.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig08, whole genome shotgun sequence 33,602
BEWT01000009.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig09, whole genome shotgun sequence 56,440
BEWT01000010.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig10, whole genome shotgun sequence 97,328
BEWT01000011.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig11, whole genome shotgun sequence 89,532
BEWT01000012.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig12, whole genome shotgun sequence 241,103
BEWT01000013.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig13, whole genome shotgun sequence 96,606
BEWT01000014.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig14, whole genome shotgun sequence 1,769
BEWT01000015.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig15, whole genome shotgun sequence 296,585
BEWT01000016.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig16, whole genome shotgun sequence 275,674
BEWT01000017.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig17, whole genome shotgun sequence 266
BEWT01000018.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig18, whole genome shotgun sequence 4,064
BEWT01000019.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig19, whole genome shotgun sequence 11,752
BEWT01000020.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig20, whole genome shotgun sequence 12,237
BEWT01000021.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig21, whole genome shotgun sequence 556
BEWT01000022.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig22, whole genome shotgun sequence 350
BEWT01000023.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig23, whole genome shotgun sequence 306
BEWT01000024.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig24, whole genome shotgun sequence 563
BEWT01000025.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig25, whole genome shotgun sequence 299
BEWT01000026.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig26, whole genome shotgun sequence 566
BEWT01000027.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig27, whole genome shotgun sequence 197
BEWT01000028.1 Desulfurococcaceae archaeon AG1 DNA, AG1contig28, whole genome shotgun sequence 197

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory