fast.genomicscompare 6,575 genera of bacteria & archaea

 

BY39 sp003327435 BY39

Genome identifier: GCA_003327435.1

NCBI assembly name: ASM332743v1

GTDB taxonomy: Bacteria, Bacteroidota, UBA10030, UBA10030, BY39, BY39, BY39 sp003327435

NCBI taxonomy: Bacteria, Ignavibacteriota

Scaffolds: 23

Genes: 2,271 Protein-coding: 2,221 RNAs: 50 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
QOQV01000001.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_8, whole genome shotgun sequence 511,651
QOQV01000002.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_42, whole genome shotgun sequence 264,447
QOQV01000003.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_71, whole genome shotgun sequence 201,760
QOQV01000004.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_72, whole genome shotgun sequence 198,625
QOQV01000005.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_73, whole genome shotgun sequence 197,574
QOQV01000006.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_90, whole genome shotgun sequence 174,064
QOQV01000007.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_109, whole genome shotgun sequence 151,836
QOQV01000008.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_156, whole genome shotgun sequence 126,546
QOQV01000009.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_157, whole genome shotgun sequence 126,167
QOQV01000010.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_189, whole genome shotgun sequence 109,795
QOQV01000011.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_242, whole genome shotgun sequence 87,981
QOQV01000012.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_264, whole genome shotgun sequence 79,470
QOQV01000013.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_268, whole genome shotgun sequence 78,029
QOQV01000014.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_318, whole genome shotgun sequence 63,780
QOQV01000015.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_398, whole genome shotgun sequence 53,205
QOQV01000016.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_418, whole genome shotgun sequence 51,436
QOQV01000017.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_421, whole genome shotgun sequence 51,222
QOQV01000018.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_813, whole genome shotgun sequence 27,906
QOQV01000019.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_846, whole genome shotgun sequence 26,777
QOQV01000020.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_933, whole genome shotgun sequence 23,930
QOQV01000021.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_1479, whole genome shotgun sequence 13,634
QOQV01000022.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_3988, whole genome shotgun sequence 4,367
QOQV01000023.1 MAG: Ignavibacteriae bacterium isolate BY39 NODE_8895, whole genome shotgun sequence 2,136

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory