fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA3402 sp003478355 AM48-27BH

Genome identifier: GCA_003478355.1

NCBI assembly name: ASM347835v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, UBA3402, UBA3402 sp003478355

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 160

Genes: 4,292 Protein-coding: 3,689 RNAs: 78 pseudogenes: 525

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
QUFC01000001.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf1, whole genome shotgun sequence 317,131
QUFC01000002.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf2, whole genome shotgun sequence 233,559
QUFC01000003.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf3, whole genome shotgun sequence 162,158
QUFC01000004.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf4, whole genome shotgun sequence 155,938
QUFC01000005.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf5, whole genome shotgun sequence 152,020
QUFC01000006.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf6, whole genome shotgun sequence 143,817
QUFC01000007.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf7, whole genome shotgun sequence 118,246
QUFC01000008.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf8, whole genome shotgun sequence 107,530
QUFC01000009.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf9, whole genome shotgun sequence 106,264
QUFC01000010.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf10, whole genome shotgun sequence 104,502
QUFC01000011.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf11, whole genome shotgun sequence 96,620
QUFC01000012.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf12, whole genome shotgun sequence 89,303
QUFC01000013.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf13, whole genome shotgun sequence 88,688
QUFC01000014.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf14, whole genome shotgun sequence 86,625
QUFC01000015.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf15, whole genome shotgun sequence 83,755
QUFC01000016.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf16, whole genome shotgun sequence 77,422
QUFC01000017.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf17, whole genome shotgun sequence 67,397
QUFC01000018.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf18, whole genome shotgun sequence 67,129
QUFC01000019.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf19, whole genome shotgun sequence 65,005
QUFC01000020.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf20, whole genome shotgun sequence 60,956
QUFC01000021.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf21, whole genome shotgun sequence 60,793
QUFC01000022.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf22, whole genome shotgun sequence 59,672
QUFC01000023.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf23, whole genome shotgun sequence 59,355
QUFC01000024.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf24, whole genome shotgun sequence 59,098
QUFC01000025.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf25, whole genome shotgun sequence 58,968
QUFC01000026.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf26, whole genome shotgun sequence 58,559
QUFC01000027.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf27, whole genome shotgun sequence 54,752
QUFC01000028.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf28, whole genome shotgun sequence 54,389
QUFC01000029.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf29, whole genome shotgun sequence 54,130
QUFC01000030.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf30, whole genome shotgun sequence 53,689
QUFC01000031.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf31, whole genome shotgun sequence 51,409
QUFC01000032.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf32, whole genome shotgun sequence 48,434
QUFC01000033.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf33, whole genome shotgun sequence 47,035
QUFC01000034.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf34, whole genome shotgun sequence 46,564
QUFC01000035.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf35, whole genome shotgun sequence 45,923
QUFC01000036.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf36, whole genome shotgun sequence 45,045
QUFC01000037.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf37, whole genome shotgun sequence 44,348
QUFC01000038.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf38, whole genome shotgun sequence 43,887
QUFC01000039.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf39, whole genome shotgun sequence 43,851
QUFC01000040.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf40, whole genome shotgun sequence 43,539
QUFC01000041.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf41, whole genome shotgun sequence 40,402
QUFC01000042.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf42, whole genome shotgun sequence 38,878
QUFC01000043.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf43, whole genome shotgun sequence 36,965
QUFC01000044.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf44, whole genome shotgun sequence 34,452
QUFC01000045.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf45, whole genome shotgun sequence 32,339
QUFC01000046.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf46, whole genome shotgun sequence 31,874
QUFC01000047.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf47, whole genome shotgun sequence 31,045
QUFC01000048.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf48, whole genome shotgun sequence 29,181
QUFC01000049.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf49, whole genome shotgun sequence 27,967
QUFC01000050.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf50, whole genome shotgun sequence 26,755
QUFC01000051.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf51, whole genome shotgun sequence 26,338
QUFC01000052.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf52, whole genome shotgun sequence 23,468
QUFC01000053.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf53, whole genome shotgun sequence 23,391
QUFC01000054.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf54, whole genome shotgun sequence 22,583
QUFC01000055.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf55, whole genome shotgun sequence 20,735
QUFC01000056.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf56, whole genome shotgun sequence 20,365
QUFC01000057.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf57, whole genome shotgun sequence 19,944
QUFC01000058.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf58, whole genome shotgun sequence 19,289
QUFC01000059.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf59, whole genome shotgun sequence 19,145
QUFC01000060.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf60, whole genome shotgun sequence 17,676
QUFC01000061.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf61, whole genome shotgun sequence 17,516
QUFC01000062.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf62, whole genome shotgun sequence 17,271
QUFC01000063.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf63, whole genome shotgun sequence 15,995
QUFC01000064.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf64, whole genome shotgun sequence 15,416
QUFC01000065.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf65, whole genome shotgun sequence 15,279
QUFC01000066.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf66, whole genome shotgun sequence 15,156
QUFC01000067.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf67, whole genome shotgun sequence 14,958
QUFC01000068.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf68, whole genome shotgun sequence 14,379
QUFC01000069.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf69, whole genome shotgun sequence 13,382
QUFC01000070.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf70, whole genome shotgun sequence 13,217
QUFC01000071.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf71, whole genome shotgun sequence 12,300
QUFC01000072.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf72, whole genome shotgun sequence 11,972
QUFC01000073.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf73, whole genome shotgun sequence 10,764
QUFC01000074.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf74, whole genome shotgun sequence 10,196
QUFC01000075.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf75, whole genome shotgun sequence 9,470
QUFC01000076.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf76, whole genome shotgun sequence 8,134
QUFC01000077.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf77, whole genome shotgun sequence 7,376
QUFC01000078.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf78, whole genome shotgun sequence 6,833
QUFC01000079.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf79, whole genome shotgun sequence 5,914
QUFC01000080.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf80, whole genome shotgun sequence 5,827
QUFC01000081.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf81, whole genome shotgun sequence 5,528
QUFC01000082.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf82, whole genome shotgun sequence 4,847
QUFC01000083.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf83, whole genome shotgun sequence 4,772
QUFC01000084.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf84, whole genome shotgun sequence 4,687
QUFC01000085.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf85, whole genome shotgun sequence 4,507
QUFC01000086.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf86, whole genome shotgun sequence 4,370
QUFC01000087.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf87, whole genome shotgun sequence 3,702
QUFC01000088.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf88, whole genome shotgun sequence 3,595
QUFC01000089.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf89, whole genome shotgun sequence 3,334
QUFC01000090.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf90, whole genome shotgun sequence 3,331
QUFC01000091.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf91, whole genome shotgun sequence 3,312
QUFC01000092.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf92, whole genome shotgun sequence 3,232
QUFC01000093.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf93, whole genome shotgun sequence 3,060
QUFC01000094.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf94, whole genome shotgun sequence 3,041
QUFC01000095.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf95, whole genome shotgun sequence 2,854
QUFC01000096.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf96, whole genome shotgun sequence 2,771
QUFC01000097.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf97, whole genome shotgun sequence 2,758
QUFC01000098.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf98, whole genome shotgun sequence 2,742
QUFC01000099.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf99, whole genome shotgun sequence 2,671
QUFC01000100.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf100, whole genome shotgun sequence 2,605
QUFC01000101.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf101, whole genome shotgun sequence 2,505
QUFC01000102.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf102, whole genome shotgun sequence 2,483
QUFC01000103.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf103, whole genome shotgun sequence 2,467
QUFC01000104.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf104, whole genome shotgun sequence 2,348
QUFC01000105.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf105, whole genome shotgun sequence 2,160
QUFC01000106.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf106, whole genome shotgun sequence 1,930
QUFC01000107.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf107, whole genome shotgun sequence 1,815
QUFC01000108.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf108, whole genome shotgun sequence 1,678
QUFC01000109.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf109, whole genome shotgun sequence 1,677
QUFC01000110.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf110, whole genome shotgun sequence 1,676
QUFC01000111.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf111, whole genome shotgun sequence 1,671
QUFC01000112.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf112, whole genome shotgun sequence 1,545
QUFC01000113.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf113, whole genome shotgun sequence 1,492
QUFC01000114.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf114, whole genome shotgun sequence 1,485
QUFC01000115.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf115, whole genome shotgun sequence 1,450
QUFC01000116.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf116, whole genome shotgun sequence 1,441
QUFC01000117.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf117, whole genome shotgun sequence 1,421
QUFC01000118.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf118, whole genome shotgun sequence 1,402
QUFC01000119.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf119, whole genome shotgun sequence 1,399
QUFC01000120.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf120, whole genome shotgun sequence 1,309
QUFC01000121.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf121, whole genome shotgun sequence 1,280
QUFC01000122.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf122, whole genome shotgun sequence 1,279
QUFC01000123.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf123, whole genome shotgun sequence 1,253
QUFC01000124.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf124, whole genome shotgun sequence 1,224
QUFC01000125.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf125, whole genome shotgun sequence 1,222
QUFC01000126.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf126, whole genome shotgun sequence 1,090
QUFC01000127.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf127, whole genome shotgun sequence 1,072
QUFC01000128.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf128, whole genome shotgun sequence 1,038
QUFC01000129.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf129, whole genome shotgun sequence 888
QUFC01000130.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf130, whole genome shotgun sequence 830
QUFC01000131.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf131, whole genome shotgun sequence 822
QUFC01000132.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf132, whole genome shotgun sequence 822
QUFC01000133.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf133, whole genome shotgun sequence 808
QUFC01000134.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf134, whole genome shotgun sequence 799
QUFC01000135.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf135, whole genome shotgun sequence 763
QUFC01000136.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf136, whole genome shotgun sequence 738
QUFC01000137.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf137, whole genome shotgun sequence 738
QUFC01000138.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf138, whole genome shotgun sequence 730
QUFC01000139.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf139, whole genome shotgun sequence 723
QUFC01000140.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf140, whole genome shotgun sequence 703
QUFC01000141.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf141, whole genome shotgun sequence 697
QUFC01000142.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf142, whole genome shotgun sequence 651
QUFC01000143.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf143, whole genome shotgun sequence 630
QUFC01000144.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf144, whole genome shotgun sequence 630
QUFC01000145.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf145, whole genome shotgun sequence 625
QUFC01000146.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf146, whole genome shotgun sequence 608
QUFC01000147.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf147, whole genome shotgun sequence 595
QUFC01000148.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf148, whole genome shotgun sequence 595
QUFC01000149.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf149, whole genome shotgun sequence 591
QUFC01000150.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf150, whole genome shotgun sequence 591
QUFC01000151.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf151, whole genome shotgun sequence 589
QUFC01000152.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf152, whole genome shotgun sequence 588
QUFC01000153.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf153, whole genome shotgun sequence 571
QUFC01000154.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf154, whole genome shotgun sequence 570
QUFC01000155.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf155, whole genome shotgun sequence 570
QUFC01000156.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf156, whole genome shotgun sequence 567
QUFC01000157.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf157, whole genome shotgun sequence 510
QUFC01000158.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf158, whole genome shotgun sequence 508
QUFC01000159.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf159, whole genome shotgun sequence 507
QUFC01000160.1 Lachnospiraceae bacterium AM48-27BH AM48-27BH.Scaf160, whole genome shotgun sequence 505

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory