fast.genomicscompare 6,575 genera of bacteria & archaea

 

GWE2-40-63 sp003512955 UBA12394

Genome identifier: GCA_003512955.1

NCBI assembly name: ASM351295v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, SZUA-534, GWE2-40-63, GWE2-40-63 sp003512955

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Marinilabiliales

Scaffolds: 49

Genes: 4,009 Protein-coding: 3,924 RNAs: 51 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
DOTG01000001.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_7113, whole genome shotgun sequence 26,864
DOTG01000002.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2426, whole genome shotgun sequence 49,620
DOTG01000003.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1414, whole genome shotgun sequence 284,516
DOTG01000004.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2461, whole genome shotgun sequence 162,711
DOTG01000005.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_866, whole genome shotgun sequence 47,932
DOTG01000006.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_6255, whole genome shotgun sequence 18,102
DOTG01000007.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_6254, whole genome shotgun sequence 12,794
DOTG01000008.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2985, whole genome shotgun sequence 98,508
DOTG01000009.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1740, whole genome shotgun sequence 10,731
DOTG01000010.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1099, whole genome shotgun sequence 45,937
DOTG01000011.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_252, whole genome shotgun sequence 133,079
DOTG01000012.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_10849, whole genome shotgun sequence 12,797
DOTG01000013.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2493, whole genome shotgun sequence 82,979
DOTG01000014.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_660, whole genome shotgun sequence 133,955
DOTG01000015.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_705, whole genome shotgun sequence 201,242
DOTG01000016.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_219, whole genome shotgun sequence 140,856
DOTG01000017.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_3711, whole genome shotgun sequence 7,351
DOTG01000018.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_3710, whole genome shotgun sequence 7,231
DOTG01000019.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_702, whole genome shotgun sequence 9,847
DOTG01000020.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_240, whole genome shotgun sequence 191,037
DOTG01000021.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2293, whole genome shotgun sequence 9,235
DOTG01000022.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_95, whole genome shotgun sequence 97,137
DOTG01000023.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_225, whole genome shotgun sequence 124,025
DOTG01000024.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_97, whole genome shotgun sequence 25,489
DOTG01000025.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_4210, whole genome shotgun sequence 8,789
DOTG01000026.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_6, whole genome shotgun sequence 682,179
DOTG01000027.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_11282, whole genome shotgun sequence 2,566
DOTG01000028.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_945, whole genome shotgun sequence 282,303
DOTG01000029.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_6266, whole genome shotgun sequence 15,199
DOTG01000030.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2252, whole genome shotgun sequence 9,853
DOTG01000031.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2690, whole genome shotgun sequence 33,623
DOTG01000032.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1542, whole genome shotgun sequence 20,815
DOTG01000033.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1369, whole genome shotgun sequence 151,274
DOTG01000034.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_21228, whole genome shotgun sequence 2,581
DOTG01000035.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_816, whole genome shotgun sequence 38,772
DOTG01000036.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_509, whole genome shotgun sequence 30,357
DOTG01000037.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_226, whole genome shotgun sequence 48,723
DOTG01000038.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_7, whole genome shotgun sequence 402,519
DOTG01000039.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1137, whole genome shotgun sequence 47,670
DOTG01000040.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_182, whole genome shotgun sequence 255,676
DOTG01000041.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_638, whole genome shotgun sequence 380,493
DOTG01000042.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_205, whole genome shotgun sequence 32,460
DOTG01000043.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_370, whole genome shotgun sequence 71,716
DOTG01000044.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_185, whole genome shotgun sequence 229,980
DOTG01000045.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1262, whole genome shotgun sequence 75,810
DOTG01000046.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2835, whole genome shotgun sequence 70,464
DOTG01000047.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_893, whole genome shotgun sequence 131,308
DOTG01000048.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_2317, whole genome shotgun sequence 88,232
DOTG01000049.1 MAG TPA_asm: Marinilabiliales bacterium isolate UBA12394 contig_1468, whole genome shotgun sequence 38,531

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory