fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA3282 sp003612405 0.1xD8-71

Genome identifier: GCA_003612405.1

NCBI assembly name: ASM361240v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, UBA3282, UBA3282 sp003612405

NCBI taxonomy: Bacteria

Scaffolds: 73

Genes: 4,008 Protein-coding: 3,809 RNAs: 55 pseudogenes: 144

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
RAYR01000001.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold1_1, whole genome shotgun sequence 308,256
RAYR01000002.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold2_1, whole genome shotgun sequence 192,934
RAYR01000003.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold2_2, whole genome shotgun sequence 68,876
RAYR01000004.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold3_1, whole genome shotgun sequence 228,845
RAYR01000005.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold3_2, whole genome shotgun sequence 1,055
RAYR01000006.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold3_3, whole genome shotgun sequence 915
RAYR01000007.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold3_4, whole genome shotgun sequence 21,924
RAYR01000008.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold4_1, whole genome shotgun sequence 252,037
RAYR01000009.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold5_1, whole genome shotgun sequence 223,460
RAYR01000010.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold6_1, whole genome shotgun sequence 210,668
RAYR01000011.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold7_1, whole genome shotgun sequence 183,355
RAYR01000012.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold8_1, whole genome shotgun sequence 178,397
RAYR01000013.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold9_1, whole genome shotgun sequence 177,333
RAYR01000014.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold10_1, whole genome shotgun sequence 173,130
RAYR01000015.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold11_1, whole genome shotgun sequence 166,283
RAYR01000016.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold12_1, whole genome shotgun sequence 154,407
RAYR01000017.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold13_1, whole genome shotgun sequence 121,257
RAYR01000018.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold14_1, whole genome shotgun sequence 115,417
RAYR01000019.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold15_1, whole genome shotgun sequence 106,724
RAYR01000020.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold16_1, whole genome shotgun sequence 105,027
RAYR01000021.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold17_1, whole genome shotgun sequence 87,659
RAYR01000022.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold18_1, whole genome shotgun sequence 83,709
RAYR01000023.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold19_1, whole genome shotgun sequence 79,673
RAYR01000024.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold20_1, whole genome shotgun sequence 71,759
RAYR01000025.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold21_1, whole genome shotgun sequence 71,589
RAYR01000026.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold22_1, whole genome shotgun sequence 68,609
RAYR01000027.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold23_1, whole genome shotgun sequence 68,533
RAYR01000028.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold24_1, whole genome shotgun sequence 68,207
RAYR01000029.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold25_1, whole genome shotgun sequence 55,937
RAYR01000030.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold26_1, whole genome shotgun sequence 48,497
RAYR01000031.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold27_1, whole genome shotgun sequence 44,804
RAYR01000032.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold28_1, whole genome shotgun sequence 40,300
RAYR01000033.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold29_1, whole genome shotgun sequence 38,581
RAYR01000034.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold30_1, whole genome shotgun sequence 28,827
RAYR01000035.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold31_1, whole genome shotgun sequence 27,639
RAYR01000036.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold32_1, whole genome shotgun sequence 26,923
RAYR01000037.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold33_1, whole genome shotgun sequence 26,716
RAYR01000038.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold34_1, whole genome shotgun sequence 17,951
RAYR01000039.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold35_1, whole genome shotgun sequence 14,374
RAYR01000040.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold36_1, whole genome shotgun sequence 13,715
RAYR01000041.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold37_1, whole genome shotgun sequence 10,813
RAYR01000042.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold38_1, whole genome shotgun sequence 10,731
RAYR01000043.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold39_1, whole genome shotgun sequence 1,171
RAYR01000044.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold39_2, whole genome shotgun sequence 9,469
RAYR01000045.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold40_1, whole genome shotgun sequence 10,249
RAYR01000046.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold41_1, whole genome shotgun sequence 9,011
RAYR01000047.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold42_1, whole genome shotgun sequence 8,759
RAYR01000048.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold43_1, whole genome shotgun sequence 8,031
RAYR01000049.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold44_1, whole genome shotgun sequence 7,913
RAYR01000050.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold45_1, whole genome shotgun sequence 6,154
RAYR01000051.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold46_1, whole genome shotgun sequence 3,959
RAYR01000052.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold47_1, whole genome shotgun sequence 3,958
RAYR01000053.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold48_1, whole genome shotgun sequence 3,446
RAYR01000054.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold49_1, whole genome shotgun sequence 3,131
RAYR01000055.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold50_1, whole genome shotgun sequence 3,079
RAYR01000056.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold51_1, whole genome shotgun sequence 2,917
RAYR01000057.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold52_1, whole genome shotgun sequence 2,675
RAYR01000058.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold53_1, whole genome shotgun sequence 2,361
RAYR01000059.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold54_1, whole genome shotgun sequence 1,875
RAYR01000060.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold55_1, whole genome shotgun sequence 1,759
RAYR01000061.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold56_1, whole genome shotgun sequence 1,740
RAYR01000062.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold57_1, whole genome shotgun sequence 1,586
RAYR01000063.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold58_1, whole genome shotgun sequence 1,577
RAYR01000064.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold59_1, whole genome shotgun sequence 1,572
RAYR01000065.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold60_1, whole genome shotgun sequence 1,539
RAYR01000066.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold61_1, whole genome shotgun sequence 1,390
RAYR01000067.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold62_1, whole genome shotgun sequence 1,380
RAYR01000068.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold63_1, whole genome shotgun sequence 1,349
RAYR01000069.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold64_1, whole genome shotgun sequence 1,294
RAYR01000070.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold65_1, whole genome shotgun sequence 1,037
RAYR01000071.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold66_1, whole genome shotgun sequence 816
RAYR01000072.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold67_1, whole genome shotgun sequence 580
RAYR01000073.1 Bacterium 0.1xD8-71 strain 0.1xD8-71 Scaffold68_1, whole genome shotgun sequence 569

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory