fast.genomicscompare 6,575 genera of bacteria & archaea

 

C-53 sp003612525 C-53

Genome identifier: GCA_003612525.1

NCBI assembly name: ASM361252v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, C-53, C-53 sp003612525

NCBI taxonomy: Bacteria

Scaffolds: 132

Genes: 3,961 Protein-coding: 3,743 RNAs: 59 pseudogenes: 159

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
RAZD01000001.1 Bacterium C-53 strain C-53 Scaffold1_1, whole genome shotgun sequence 369,478
RAZD01000002.1 Bacterium C-53 strain C-53 Scaffold2_1, whole genome shotgun sequence 311,000
RAZD01000003.1 Bacterium C-53 strain C-53 Scaffold3_1, whole genome shotgun sequence 202,277
RAZD01000004.1 Bacterium C-53 strain C-53 Scaffold4_1, whole genome shotgun sequence 195,233
RAZD01000005.1 Bacterium C-53 strain C-53 Scaffold5_1, whole genome shotgun sequence 194,934
RAZD01000006.1 Bacterium C-53 strain C-53 Scaffold6_1, whole genome shotgun sequence 192,856
RAZD01000007.1 Bacterium C-53 strain C-53 Scaffold7_1, whole genome shotgun sequence 192,679
RAZD01000008.1 Bacterium C-53 strain C-53 Scaffold8_1, whole genome shotgun sequence 180,865
RAZD01000009.1 Bacterium C-53 strain C-53 Scaffold9_1, whole genome shotgun sequence 170,010
RAZD01000010.1 Bacterium C-53 strain C-53 Scaffold10_1, whole genome shotgun sequence 135,595
RAZD01000011.1 Bacterium C-53 strain C-53 Scaffold11_1, whole genome shotgun sequence 108,816
RAZD01000012.1 Bacterium C-53 strain C-53 Scaffold12_1, whole genome shotgun sequence 102,569
RAZD01000013.1 Bacterium C-53 strain C-53 Scaffold13_1, whole genome shotgun sequence 101,634
RAZD01000014.1 Bacterium C-53 strain C-53 Scaffold14_1, whole genome shotgun sequence 93,120
RAZD01000015.1 Bacterium C-53 strain C-53 Scaffold15_1, whole genome shotgun sequence 92,317
RAZD01000016.1 Bacterium C-53 strain C-53 Scaffold16_1, whole genome shotgun sequence 88,192
RAZD01000017.1 Bacterium C-53 strain C-53 Scaffold17_1, whole genome shotgun sequence 79,031
RAZD01000018.1 Bacterium C-53 strain C-53 Scaffold18_1, whole genome shotgun sequence 76,111
RAZD01000019.1 Bacterium C-53 strain C-53 Scaffold19_1, whole genome shotgun sequence 74,199
RAZD01000020.1 Bacterium C-53 strain C-53 Scaffold20_1, whole genome shotgun sequence 69,210
RAZD01000021.1 Bacterium C-53 strain C-53 Scaffold21_1, whole genome shotgun sequence 67,110
RAZD01000022.1 Bacterium C-53 strain C-53 Scaffold22_1, whole genome shotgun sequence 63,371
RAZD01000023.1 Bacterium C-53 strain C-53 Scaffold23_1, whole genome shotgun sequence 58,508
RAZD01000024.1 Bacterium C-53 strain C-53 Scaffold24_1, whole genome shotgun sequence 53,940
RAZD01000025.1 Bacterium C-53 strain C-53 Scaffold25_1, whole genome shotgun sequence 52,120
RAZD01000026.1 Bacterium C-53 strain C-53 Scaffold26_1, whole genome shotgun sequence 50,138
RAZD01000027.1 Bacterium C-53 strain C-53 Scaffold27_1, whole genome shotgun sequence 49,166
RAZD01000028.1 Bacterium C-53 strain C-53 Scaffold28_1, whole genome shotgun sequence 47,837
RAZD01000029.1 Bacterium C-53 strain C-53 Scaffold29_1, whole genome shotgun sequence 44,904
RAZD01000030.1 Bacterium C-53 strain C-53 Scaffold30_1, whole genome shotgun sequence 34,258
RAZD01000031.1 Bacterium C-53 strain C-53 Scaffold31_1, whole genome shotgun sequence 32,928
RAZD01000032.1 Bacterium C-53 strain C-53 Scaffold32_1, whole genome shotgun sequence 32,410
RAZD01000033.1 Bacterium C-53 strain C-53 Scaffold33_1, whole genome shotgun sequence 30,647
RAZD01000034.1 Bacterium C-53 strain C-53 Scaffold34_1, whole genome shotgun sequence 26,452
RAZD01000035.1 Bacterium C-53 strain C-53 Scaffold35_1, whole genome shotgun sequence 25,924
RAZD01000036.1 Bacterium C-53 strain C-53 Scaffold36_1, whole genome shotgun sequence 20,313
RAZD01000037.1 Bacterium C-53 strain C-53 Scaffold37_1, whole genome shotgun sequence 17,872
RAZD01000038.1 Bacterium C-53 strain C-53 Scaffold38_1, whole genome shotgun sequence 17,700
RAZD01000039.1 Bacterium C-53 strain C-53 Scaffold39_1, whole genome shotgun sequence 14,961
RAZD01000040.1 Bacterium C-53 strain C-53 Scaffold40_1, whole genome shotgun sequence 12,957
RAZD01000041.1 Bacterium C-53 strain C-53 Scaffold41_1, whole genome shotgun sequence 12,335
RAZD01000042.1 Bacterium C-53 strain C-53 Scaffold42_1, whole genome shotgun sequence 11,785
RAZD01000043.1 Bacterium C-53 strain C-53 Scaffold43_1, whole genome shotgun sequence 11,773
RAZD01000044.1 Bacterium C-53 strain C-53 Scaffold44_1, whole genome shotgun sequence 10,742
RAZD01000045.1 Bacterium C-53 strain C-53 Scaffold45_1, whole genome shotgun sequence 10,561
RAZD01000046.1 Bacterium C-53 strain C-53 Scaffold46_1, whole genome shotgun sequence 9,310
RAZD01000047.1 Bacterium C-53 strain C-53 Scaffold47_1, whole genome shotgun sequence 7,769
RAZD01000048.1 Bacterium C-53 strain C-53 Scaffold48_1, whole genome shotgun sequence 7,400
RAZD01000049.1 Bacterium C-53 strain C-53 Scaffold49_1, whole genome shotgun sequence 6,796
RAZD01000050.1 Bacterium C-53 strain C-53 Scaffold50_1, whole genome shotgun sequence 2,029
RAZD01000051.1 Bacterium C-53 strain C-53 Scaffold50_2, whole genome shotgun sequence 3,824
RAZD01000052.1 Bacterium C-53 strain C-53 Scaffold51_1, whole genome shotgun sequence 6,563
RAZD01000053.1 Bacterium C-53 strain C-53 Scaffold52_1, whole genome shotgun sequence 6,340
RAZD01000054.1 Bacterium C-53 strain C-53 Scaffold53_1, whole genome shotgun sequence 6,050
RAZD01000055.1 Bacterium C-53 strain C-53 Scaffold54_1, whole genome shotgun sequence 5,941
RAZD01000056.1 Bacterium C-53 strain C-53 Scaffold55_1, whole genome shotgun sequence 5,545
RAZD01000057.1 Bacterium C-53 strain C-53 Scaffold56_1, whole genome shotgun sequence 5,334
RAZD01000058.1 Bacterium C-53 strain C-53 Scaffold57_1, whole genome shotgun sequence 1,901
RAZD01000059.1 Bacterium C-53 strain C-53 Scaffold57_2, whole genome shotgun sequence 3,103
RAZD01000060.1 Bacterium C-53 strain C-53 Scaffold58_1, whole genome shotgun sequence 4,645
RAZD01000061.1 Bacterium C-53 strain C-53 Scaffold59_1, whole genome shotgun sequence 4,568
RAZD01000062.1 Bacterium C-53 strain C-53 Scaffold60_1, whole genome shotgun sequence 3,192
RAZD01000063.1 Bacterium C-53 strain C-53 Scaffold61_1, whole genome shotgun sequence 3,167
RAZD01000064.1 Bacterium C-53 strain C-53 Scaffold62_1, whole genome shotgun sequence 3,110
RAZD01000065.1 Bacterium C-53 strain C-53 Scaffold63_1, whole genome shotgun sequence 3,029
RAZD01000066.1 Bacterium C-53 strain C-53 Scaffold64_1, whole genome shotgun sequence 2,887
RAZD01000067.1 Bacterium C-53 strain C-53 Scaffold65_1, whole genome shotgun sequence 2,839
RAZD01000068.1 Bacterium C-53 strain C-53 Scaffold66_1, whole genome shotgun sequence 2,669
RAZD01000069.1 Bacterium C-53 strain C-53 Scaffold67_1, whole genome shotgun sequence 2,620
RAZD01000070.1 Bacterium C-53 strain C-53 Scaffold68_1, whole genome shotgun sequence 2,597
RAZD01000071.1 Bacterium C-53 strain C-53 Scaffold69_1, whole genome shotgun sequence 2,371
RAZD01000072.1 Bacterium C-53 strain C-53 Scaffold70_1, whole genome shotgun sequence 2,309
RAZD01000073.1 Bacterium C-53 strain C-53 Scaffold71_1, whole genome shotgun sequence 2,212
RAZD01000074.1 Bacterium C-53 strain C-53 Scaffold72_1, whole genome shotgun sequence 2,038
RAZD01000075.1 Bacterium C-53 strain C-53 Scaffold73_1, whole genome shotgun sequence 1,961
RAZD01000076.1 Bacterium C-53 strain C-53 Scaffold74_1, whole genome shotgun sequence 1,890
RAZD01000077.1 Bacterium C-53 strain C-53 Scaffold75_1, whole genome shotgun sequence 1,857
RAZD01000078.1 Bacterium C-53 strain C-53 Scaffold76_1, whole genome shotgun sequence 1,835
RAZD01000079.1 Bacterium C-53 strain C-53 Scaffold77_1, whole genome shotgun sequence 1,834
RAZD01000080.1 Bacterium C-53 strain C-53 Scaffold78_1, whole genome shotgun sequence 1,744
RAZD01000081.1 Bacterium C-53 strain C-53 Scaffold79_1, whole genome shotgun sequence 1,735
RAZD01000082.1 Bacterium C-53 strain C-53 Scaffold80_1, whole genome shotgun sequence 1,726
RAZD01000083.1 Bacterium C-53 strain C-53 Scaffold81_1, whole genome shotgun sequence 1,589
RAZD01000084.1 Bacterium C-53 strain C-53 Scaffold82_1, whole genome shotgun sequence 1,545
RAZD01000085.1 Bacterium C-53 strain C-53 Scaffold83_1, whole genome shotgun sequence 1,541
RAZD01000086.1 Bacterium C-53 strain C-53 Scaffold84_1, whole genome shotgun sequence 1,453
RAZD01000087.1 Bacterium C-53 strain C-53 Scaffold85_1, whole genome shotgun sequence 1,407
RAZD01000088.1 Bacterium C-53 strain C-53 Scaffold86_1, whole genome shotgun sequence 1,407
RAZD01000089.1 Bacterium C-53 strain C-53 Scaffold87_1, whole genome shotgun sequence 1,392
RAZD01000090.1 Bacterium C-53 strain C-53 Scaffold88_1, whole genome shotgun sequence 1,342
RAZD01000091.1 Bacterium C-53 strain C-53 Scaffold89_1, whole genome shotgun sequence 1,314
RAZD01000092.1 Bacterium C-53 strain C-53 Scaffold90_1, whole genome shotgun sequence 1,278
RAZD01000093.1 Bacterium C-53 strain C-53 Scaffold91_1, whole genome shotgun sequence 1,251
RAZD01000094.1 Bacterium C-53 strain C-53 Scaffold92_1, whole genome shotgun sequence 1,235
RAZD01000095.1 Bacterium C-53 strain C-53 Scaffold93_1, whole genome shotgun sequence 1,193
RAZD01000096.1 Bacterium C-53 strain C-53 Scaffold94_1, whole genome shotgun sequence 1,117
RAZD01000097.1 Bacterium C-53 strain C-53 Scaffold95_1, whole genome shotgun sequence 1,113
RAZD01000098.1 Bacterium C-53 strain C-53 Scaffold96_1, whole genome shotgun sequence 1,087
RAZD01000099.1 Bacterium C-53 strain C-53 Scaffold97_1, whole genome shotgun sequence 1,078
RAZD01000100.1 Bacterium C-53 strain C-53 Scaffold98_1, whole genome shotgun sequence 1,069
RAZD01000101.1 Bacterium C-53 strain C-53 Scaffold99_1, whole genome shotgun sequence 1,042
RAZD01000102.1 Bacterium C-53 strain C-53 Scaffold100_1, whole genome shotgun sequence 1,042
RAZD01000103.1 Bacterium C-53 strain C-53 Scaffold101_1, whole genome shotgun sequence 1,029
RAZD01000104.1 Bacterium C-53 strain C-53 Scaffold102_1, whole genome shotgun sequence 1,019
RAZD01000105.1 Bacterium C-53 strain C-53 Scaffold103_1, whole genome shotgun sequence 1,009
RAZD01000106.1 Bacterium C-53 strain C-53 Scaffold104_1, whole genome shotgun sequence 992
RAZD01000107.1 Bacterium C-53 strain C-53 Scaffold105_1, whole genome shotgun sequence 990
RAZD01000108.1 Bacterium C-53 strain C-53 Scaffold106_1, whole genome shotgun sequence 925
RAZD01000109.1 Bacterium C-53 strain C-53 Scaffold107_1, whole genome shotgun sequence 915
RAZD01000110.1 Bacterium C-53 strain C-53 Scaffold108_1, whole genome shotgun sequence 909
RAZD01000111.1 Bacterium C-53 strain C-53 Scaffold109_1, whole genome shotgun sequence 877
RAZD01000112.1 Bacterium C-53 strain C-53 Scaffold110_1, whole genome shotgun sequence 860
RAZD01000113.1 Bacterium C-53 strain C-53 Scaffold111_1, whole genome shotgun sequence 852
RAZD01000114.1 Bacterium C-53 strain C-53 Scaffold112_1, whole genome shotgun sequence 849
RAZD01000115.1 Bacterium C-53 strain C-53 Scaffold113_1, whole genome shotgun sequence 836
RAZD01000116.1 Bacterium C-53 strain C-53 Scaffold114_1, whole genome shotgun sequence 812
RAZD01000117.1 Bacterium C-53 strain C-53 Scaffold115_1, whole genome shotgun sequence 797
RAZD01000118.1 Bacterium C-53 strain C-53 Scaffold116_1, whole genome shotgun sequence 768
RAZD01000119.1 Bacterium C-53 strain C-53 Scaffold117_1, whole genome shotgun sequence 697
RAZD01000120.1 Bacterium C-53 strain C-53 Scaffold118_1, whole genome shotgun sequence 692
RAZD01000121.1 Bacterium C-53 strain C-53 Scaffold119_1, whole genome shotgun sequence 657
RAZD01000122.1 Bacterium C-53 strain C-53 Scaffold120_1, whole genome shotgun sequence 653
RAZD01000123.1 Bacterium C-53 strain C-53 Scaffold121_1, whole genome shotgun sequence 639
RAZD01000124.1 Bacterium C-53 strain C-53 Scaffold122_1, whole genome shotgun sequence 596
RAZD01000125.1 Bacterium C-53 strain C-53 Scaffold123_1, whole genome shotgun sequence 564
RAZD01000126.1 Bacterium C-53 strain C-53 Scaffold124_1, whole genome shotgun sequence 557
RAZD01000127.1 Bacterium C-53 strain C-53 Scaffold125_1, whole genome shotgun sequence 557
RAZD01000128.1 Bacterium C-53 strain C-53 Scaffold126_1, whole genome shotgun sequence 530
RAZD01000129.1 Bacterium C-53 strain C-53 Scaffold127_1, whole genome shotgun sequence 516
RAZD01000130.1 Bacterium C-53 strain C-53 Scaffold128_1, whole genome shotgun sequence 513
RAZD01000131.1 Bacterium C-53 strain C-53 Scaffold129_1, whole genome shotgun sequence 510
RAZD01000132.1 Bacterium C-53 strain C-53 Scaffold130_1, whole genome shotgun sequence 502

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory