fast.genomicscompare 6,575 genera of bacteria & archaea

 

SHNJ01 sp004295055 Bin14_1

Genome identifier: GCA_004295055.1

NCBI assembly name: ASM429505v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, SHNJ01, SHNJ01, SHNJ01, SHNJ01 sp004295055

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 37

Genes: 1,955 Protein-coding: 1,901 RNAs: 46 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
SHNJ01000001.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001162, whole genome shotgun sequence 7,493
SHNJ01000002.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000931, whole genome shotgun sequence 10,854
SHNJ01000003.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000601, whole genome shotgun sequence 20,434
SHNJ01000004.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000534, whole genome shotgun sequence 24,176
SHNJ01000005.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000664, whole genome shotgun sequence 17,625
SHNJ01000006.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000057, whole genome shotgun sequence 113,769
SHNJ01000007.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000017, whole genome shotgun sequence 230,806
SHNJ01000008.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001108, whole genome shotgun sequence 8,048
SHNJ01000009.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000723, whole genome shotgun sequence 15,353
SHNJ01000010.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000088, whole genome shotgun sequence 81,994
SHNJ01000011.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001478, whole genome shotgun sequence 4,893
SHNJ01000012.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000026, whole genome shotgun sequence 205,062
SHNJ01000013.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000292, whole genome shotgun sequence 41,713
SHNJ01000014.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000489, whole genome shotgun sequence 26,866
SHNJ01000015.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000322, whole genome shotgun sequence 40,206
SHNJ01000016.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000414, whole genome shotgun sequence 32,756
SHNJ01000017.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000053, whole genome shotgun sequence 118,633
SHNJ01000018.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001251, whole genome shotgun sequence 6,500
SHNJ01000019.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001444, whole genome shotgun sequence 5,089
SHNJ01000020.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000105, whole genome shotgun sequence 71,408
SHNJ01000021.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001201, whole genome shotgun sequence 7,038
SHNJ01000022.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000400, whole genome shotgun sequence 34,034
SHNJ01000023.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000669, whole genome shotgun sequence 17,367
SHNJ01000024.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000170, whole genome shotgun sequence 51,940
SHNJ01000025.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000358, whole genome shotgun sequence 37,240
SHNJ01000026.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000147, whole genome shotgun sequence 57,163
SHNJ01000027.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000452, whole genome shotgun sequence 29,503
SHNJ01000028.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000483, whole genome shotgun sequence 27,219
SHNJ01000029.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000435, whole genome shotgun sequence 31,244
SHNJ01000030.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000047, whole genome shotgun sequence 131,326
SHNJ01000031.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000011, whole genome shotgun sequence 269,900
SHNJ01000032.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000526, whole genome shotgun sequence 24,639
SHNJ01000033.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000456, whole genome shotgun sequence 29,430
SHNJ01000034.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000158, whole genome shotgun sequence 53,943
SHNJ01000035.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000222, whole genome shotgun sequence 46,013
SHNJ01000036.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000001540, whole genome shotgun sequence 4,509
SHNJ01000037.1 MAG: Alphaproteobacteria bacterium isolate Bin14_1 c_000000000857, whole genome shotgun sequence 12,257

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory