fast.genomicscompare 6,575 genera of bacteria & archaea

 

2-02-FULL-56-15 sp004297165 FW602_bin.35

Genome identifier: GCA_004297165.1

NCBI assembly name: ASM429716v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, UBA4486, UBA4486, 2-02-FULL-56-15, 2-02-FULL-56-15 sp004297165

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria

Scaffolds: 13

Genes: 3,208 Protein-coding: 3,125 RNAs: 54 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
SCUJ01000001.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-5508, whole genome shotgun sequence 218,141
SCUJ01000002.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-27337, whole genome shotgun sequence 34,231
SCUJ01000003.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-28245, whole genome shotgun sequence 15,694
SCUJ01000004.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-50393, whole genome shotgun sequence 39,862
SCUJ01000005.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-70993, whole genome shotgun sequence 304,946
SCUJ01000006.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-77538, whole genome shotgun sequence 1,783,802
SCUJ01000007.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-111850, whole genome shotgun sequence 95,958
SCUJ01000008.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-120359, whole genome shotgun sequence 534,608
SCUJ01000009.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-129473, whole genome shotgun sequence 1,553
SCUJ01000010.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-132650, whole genome shotgun sequence 149,076
SCUJ01000011.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-133532, whole genome shotgun sequence 341,730
SCUJ01000012.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-44620, whole genome shotgun sequence 2,913
SCUJ01000013.1 MAG: Gammaproteobacteria bacterium isolate FW602_bin.35 FW602_bin.35-51022, whole genome shotgun sequence 4,013

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory