fast.genomicscompare 6,575 genera of bacteria & archaea

 

SCUB01 sp004297465 FW602_bin.18

Genome identifier: GCA_004297465.1

NCBI assembly name: ASM429746v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Xanthobacteraceae, SCUB01, SCUB01 sp004297465

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Xanthobacteraceae

Scaffolds: 27

Genes: 2,998 Protein-coding: 2,906 RNAs: 54 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
SCUB01000001.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-4511, whole genome shotgun sequence 790,858
SCUB01000002.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-8480, whole genome shotgun sequence 38,013
SCUB01000003.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-11480, whole genome shotgun sequence 2,659
SCUB01000004.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-16247, whole genome shotgun sequence 73,742
SCUB01000005.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-30302, whole genome shotgun sequence 45,609
SCUB01000006.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-35495, whole genome shotgun sequence 90,400
SCUB01000007.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-36318, whole genome shotgun sequence 287,650
SCUB01000008.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-36531, whole genome shotgun sequence 1,796
SCUB01000009.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-36609, whole genome shotgun sequence 28,595
SCUB01000010.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-40276, whole genome shotgun sequence 398,215
SCUB01000011.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-61491, whole genome shotgun sequence 102,736
SCUB01000012.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-62047, whole genome shotgun sequence 1,652
SCUB01000013.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-76169, whole genome shotgun sequence 24,394
SCUB01000014.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-77095, whole genome shotgun sequence 2,671
SCUB01000015.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-79758, whole genome shotgun sequence 66,755
SCUB01000016.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-80609, whole genome shotgun sequence 21,477
SCUB01000017.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-81485, whole genome shotgun sequence 136,986
SCUB01000018.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-86154, whole genome shotgun sequence 1,700
SCUB01000019.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-89309, whole genome shotgun sequence 335,410
SCUB01000020.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-105120, whole genome shotgun sequence 236,130
SCUB01000021.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-109116, whole genome shotgun sequence 37,761
SCUB01000022.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-113019, whole genome shotgun sequence 2,330
SCUB01000023.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-125228, whole genome shotgun sequence 373,877
SCUB01000024.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-127696, whole genome shotgun sequence 7,815
SCUB01000025.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-113091, whole genome shotgun sequence 5,838
SCUB01000026.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-82614, whole genome shotgun sequence 1,739
SCUB01000027.1 MAG: Xanthobacteraceae bacterium isolate FW602_bin.18 FW602_bin.18-120202, whole genome shotgun sequence 2,704

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory