fast.genomicscompare 6,575 genera of bacteria & archaea

 

SCRT01 sp004298465 FW106-02_bin.14

Genome identifier: GCA_004298465.1

NCBI assembly name: ASM429846v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nevskiales, Nevskiaceae, SCRT01, SCRT01 sp004298465

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nevskiales, Nevskiaceae

Scaffolds: 21

Genes: 2,872 Protein-coding: 2,777 RNAs: 50 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
SCRT01000001.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-188, whole genome shotgun sequence 430,515
SCRT01000002.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-195, whole genome shotgun sequence 152,647
SCRT01000003.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-723, whole genome shotgun sequence 72,276
SCRT01000004.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-2286, whole genome shotgun sequence 254,704
SCRT01000005.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-3259, whole genome shotgun sequence 262,923
SCRT01000006.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-5198, whole genome shotgun sequence 117,420
SCRT01000007.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-5968, whole genome shotgun sequence 368,769
SCRT01000008.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-7320, whole genome shotgun sequence 1,806
SCRT01000009.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-7663, whole genome shotgun sequence 1,544
SCRT01000010.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-8234, whole genome shotgun sequence 2,235
SCRT01000011.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-8473, whole genome shotgun sequence 1,623
SCRT01000012.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-10178, whole genome shotgun sequence 356,845
SCRT01000013.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-10371, whole genome shotgun sequence 16,597
SCRT01000014.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-10746, whole genome shotgun sequence 201,989
SCRT01000015.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-12345, whole genome shotgun sequence 41,011
SCRT01000016.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-13057, whole genome shotgun sequence 16,062
SCRT01000017.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-13749, whole genome shotgun sequence 89,580
SCRT01000018.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-15817, whole genome shotgun sequence 385,376
SCRT01000019.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-16440, whole genome shotgun sequence 121,724
SCRT01000020.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-18307, whole genome shotgun sequence 137,539
SCRT01000021.1 MAG: Nevskiaceae bacterium isolate FW106-02_bin.14 FW106-02_bin.14-12531, whole genome shotgun sequence 2,216

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory