fast.genomicscompare 6,575 genera of bacteria & archaea

 

SCTA01 sp004322275 FW300_bin.28

Genome identifier: GCA_004322275.1

NCBI assembly name: ASM432227v1

GTDB taxonomy: Bacteria, Desulfobacterota_C, Deferrisomatia, Deferrisomatales, BM512, SCTA01, SCTA01 sp004322275

NCBI taxonomy: Bacteria

Scaffolds: 45

Genes: 2,569 Protein-coding: 2,490 RNAs: 57 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
SCTA01000001.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-117, whole genome shotgun sequence 113,521
SCTA01000002.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-449, whole genome shotgun sequence 38,948
SCTA01000003.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-3618, whole genome shotgun sequence 66,253
SCTA01000004.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-9973, whole genome shotgun sequence 45,592
SCTA01000005.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-12361, whole genome shotgun sequence 201,346
SCTA01000006.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-14859, whole genome shotgun sequence 95,001
SCTA01000007.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-19622, whole genome shotgun sequence 114,455
SCTA01000008.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-23454, whole genome shotgun sequence 52,718
SCTA01000009.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-26373, whole genome shotgun sequence 50,366
SCTA01000010.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-29397, whole genome shotgun sequence 8,373
SCTA01000011.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-31513, whole genome shotgun sequence 16,891
SCTA01000012.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-39058, whole genome shotgun sequence 14,577
SCTA01000013.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-48379, whole genome shotgun sequence 114,443
SCTA01000014.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-51464, whole genome shotgun sequence 103,466
SCTA01000015.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-53148, whole genome shotgun sequence 84,346
SCTA01000016.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-54455, whole genome shotgun sequence 19,630
SCTA01000017.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-61321, whole genome shotgun sequence 108,263
SCTA01000018.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-62264, whole genome shotgun sequence 134,530
SCTA01000019.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-78235, whole genome shotgun sequence 99,979
SCTA01000020.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-81036, whole genome shotgun sequence 12,628
SCTA01000021.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-83505, whole genome shotgun sequence 80,646
SCTA01000022.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-88504, whole genome shotgun sequence 128,178
SCTA01000023.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-89692, whole genome shotgun sequence 47,207
SCTA01000024.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-94565, whole genome shotgun sequence 38,852
SCTA01000025.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-97171, whole genome shotgun sequence 47,881
SCTA01000026.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-98170, whole genome shotgun sequence 32,971
SCTA01000027.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-99719, whole genome shotgun sequence 82,752
SCTA01000028.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-107961, whole genome shotgun sequence 30,134
SCTA01000029.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-108918, whole genome shotgun sequence 91,676
SCTA01000030.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-118817, whole genome shotgun sequence 18,807
SCTA01000031.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-118949, whole genome shotgun sequence 48,073
SCTA01000032.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-122378, whole genome shotgun sequence 114,666
SCTA01000033.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-125808, whole genome shotgun sequence 19,814
SCTA01000034.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-133222, whole genome shotgun sequence 85,463
SCTA01000035.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-139168, whole genome shotgun sequence 108,108
SCTA01000036.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-141154, whole genome shotgun sequence 70,798
SCTA01000037.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-154703, whole genome shotgun sequence 38,441
SCTA01000038.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-155608, whole genome shotgun sequence 13,426
SCTA01000039.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-161722, whole genome shotgun sequence 39,511
SCTA01000040.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-165819, whole genome shotgun sequence 135,096
SCTA01000041.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-167998, whole genome shotgun sequence 83,122
SCTA01000042.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-169300, whole genome shotgun sequence 20,041
SCTA01000043.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-171943, whole genome shotgun sequence 4,725
SCTA01000044.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-5759, whole genome shotgun sequence 5,645
SCTA01000045.1 MAG: bacterium isolate FW300_bin.28 FW300_bin.28-81500, whole genome shotgun sequence 1,427

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory