fast.genomicscompare 6,575 genera of bacteria & archaea

 

CF-134 sp005880985 CF_134

Genome identifier: GCA_005880985.1

NCBI assembly name: ASM588098v1

GTDB taxonomy: Bacteria, Chloroflexota, Dormibacteria, UBA8260, UBA8260, CF-134, CF-134 sp005880985

NCBI taxonomy: Bacteria, Chloroflexota

Scaffolds: 29

Genes: 3,151 Protein-coding: 3,054 RNAs: 53 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
VBIQ01000001.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_3439, whole genome shotgun sequence 11,650
VBIQ01000002.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_2166, whole genome shotgun sequence 23,613
VBIQ01000003.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_2754, whole genome shotgun sequence 13,181
VBIQ01000004.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_0, whole genome shotgun sequence 423,274
VBIQ01000005.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_2, whole genome shotgun sequence 456,313
VBIQ01000006.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_6, whole genome shotgun sequence 195,046
VBIQ01000007.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_11, whole genome shotgun sequence 414,948
VBIQ01000008.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_12, whole genome shotgun sequence 256,042
VBIQ01000009.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_14, whole genome shotgun sequence 143,648
VBIQ01000010.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_16, whole genome shotgun sequence 131,414
VBIQ01000011.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_16_e:131353, whole genome shotgun sequence 3,784
VBIQ01000012.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_19, whole genome shotgun sequence 123,689
VBIQ01000013.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_20, whole genome shotgun sequence 213,348
VBIQ01000014.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_31, whole genome shotgun sequence 104,533
VBIQ01000015.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_38, whole genome shotgun sequence 95,840
VBIQ01000016.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_66, whole genome shotgun sequence 124,069
VBIQ01000017.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_78, whole genome shotgun sequence 70,347
VBIQ01000018.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_129, whole genome shotgun sequence 56,243
VBIQ01000019.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_135, whole genome shotgun sequence 54,871
VBIQ01000020.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_141, whole genome shotgun sequence 53,914
VBIQ01000021.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_197, whole genome shotgun sequence 46,619
VBIQ01000022.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_236, whole genome shotgun sequence 43,762
VBIQ01000023.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_276, whole genome shotgun sequence 43,919
VBIQ01000024.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_315, whole genome shotgun sequence 71,377
VBIQ01000025.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_373, whole genome shotgun sequence 50,734
VBIQ01000026.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_553, whole genome shotgun sequence 39,525
VBIQ01000027.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_619, whole genome shotgun sequence 27,640
VBIQ01000028.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_22538, whole genome shotgun sequence 4,606
VBIQ01000029.1 MAG: Chloroflexi bacterium isolate CF_134 14_0927_12_20cm_scaffold_45192, whole genome shotgun sequence 2,808

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory