fast.genomicscompare 6,575 genera of bacteria & archaea

 

SB21 sp008933615 SB21

Genome identifier: GCA_008933615.1

NCBI assembly name: ASM893361v1

GTDB taxonomy: Bacteria, CLD3, CLD3, SB21, SB21, SB21, SB21 sp008933615

NCBI taxonomy: Bacteria

Scaffolds: 97

Genes: 3,315 Protein-coding: 3,224 RNAs: 61 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WBUR01000001.1 MAG: bacterium isolate SB21 contig_51, whole genome shotgun sequence 183,813
WBUR01000002.1 MAG: bacterium isolate SB21 contig_68, whole genome shotgun sequence 157,688
WBUR01000003.1 MAG: bacterium isolate SB21 contig_71, whole genome shotgun sequence 151,453
WBUR01000004.1 MAG: bacterium isolate SB21 contig_98, whole genome shotgun sequence 133,829
WBUR01000005.1 MAG: bacterium isolate SB21 contig_120, whole genome shotgun sequence 119,612
WBUR01000006.1 MAG: bacterium isolate SB21 contig_123, whole genome shotgun sequence 118,110
WBUR01000007.1 MAG: bacterium isolate SB21 contig_128, whole genome shotgun sequence 114,844
WBUR01000008.1 MAG: bacterium isolate SB21 contig_139, whole genome shotgun sequence 109,423
WBUR01000009.1 MAG: bacterium isolate SB21 contig_158, whole genome shotgun sequence 101,496
WBUR01000010.1 MAG: bacterium isolate SB21 contig_171, whole genome shotgun sequence 95,792
WBUR01000011.1 MAG: bacterium isolate SB21 contig_182, whole genome shotgun sequence 91,169
WBUR01000012.1 MAG: bacterium isolate SB21 contig_207, whole genome shotgun sequence 85,708
WBUR01000013.1 MAG: bacterium isolate SB21 contig_209, whole genome shotgun sequence 85,496
WBUR01000014.1 MAG: bacterium isolate SB21 contig_224, whole genome shotgun sequence 81,019
WBUR01000015.1 MAG: bacterium isolate SB21 contig_227, whole genome shotgun sequence 80,010
WBUR01000016.1 MAG: bacterium isolate SB21 contig_230, whole genome shotgun sequence 79,525
WBUR01000017.1 MAG: bacterium isolate SB21 contig_240, whole genome shotgun sequence 77,581
WBUR01000018.1 MAG: bacterium isolate SB21 contig_254, whole genome shotgun sequence 73,158
WBUR01000019.1 MAG: bacterium isolate SB21 contig_263, whole genome shotgun sequence 71,763
WBUR01000020.1 MAG: bacterium isolate SB21 contig_273, whole genome shotgun sequence 70,262
WBUR01000021.1 MAG: bacterium isolate SB21 contig_281, whole genome shotgun sequence 68,696
WBUR01000022.1 MAG: bacterium isolate SB21 contig_283, whole genome shotgun sequence 67,889
WBUR01000023.1 MAG: bacterium isolate SB21 contig_295, whole genome shotgun sequence 65,241
WBUR01000024.1 MAG: bacterium isolate SB21 contig_299, whole genome shotgun sequence 64,679
WBUR01000025.1 MAG: bacterium isolate SB21 contig_305, whole genome shotgun sequence 64,075
WBUR01000026.1 MAG: bacterium isolate SB21 contig_329, whole genome shotgun sequence 60,949
WBUR01000027.1 MAG: bacterium isolate SB21 contig_351, whole genome shotgun sequence 57,738
WBUR01000028.1 MAG: bacterium isolate SB21 contig_375, whole genome shotgun sequence 54,742
WBUR01000029.1 MAG: bacterium isolate SB21 contig_376, whole genome shotgun sequence 54,667
WBUR01000030.1 MAG: bacterium isolate SB21 contig_379, whole genome shotgun sequence 54,087
WBUR01000031.1 MAG: bacterium isolate SB21 contig_394, whole genome shotgun sequence 52,739
WBUR01000032.1 MAG: bacterium isolate SB21 contig_398, whole genome shotgun sequence 52,022
WBUR01000033.1 MAG: bacterium isolate SB21 contig_462, whole genome shotgun sequence 46,492
WBUR01000034.1 MAG: bacterium isolate SB21 contig_472, whole genome shotgun sequence 45,928
WBUR01000035.1 MAG: bacterium isolate SB21 contig_510, whole genome shotgun sequence 42,681
WBUR01000036.1 MAG: bacterium isolate SB21 contig_518, whole genome shotgun sequence 42,429
WBUR01000037.1 MAG: bacterium isolate SB21 contig_530, whole genome shotgun sequence 41,934
WBUR01000038.1 MAG: bacterium isolate SB21 contig_556, whole genome shotgun sequence 40,482
WBUR01000039.1 MAG: bacterium isolate SB21 contig_744, whole genome shotgun sequence 32,082
WBUR01000040.1 MAG: bacterium isolate SB21 contig_751, whole genome shotgun sequence 31,832
WBUR01000041.1 MAG: bacterium isolate SB21 contig_752, whole genome shotgun sequence 31,832
WBUR01000042.1 MAG: bacterium isolate SB21 contig_753, whole genome shotgun sequence 31,760
WBUR01000043.1 MAG: bacterium isolate SB21 contig_785, whole genome shotgun sequence 30,990
WBUR01000044.1 MAG: bacterium isolate SB21 contig_802, whole genome shotgun sequence 30,435
WBUR01000045.1 MAG: bacterium isolate SB21 contig_823, whole genome shotgun sequence 29,615
WBUR01000046.1 MAG: bacterium isolate SB21 contig_839, whole genome shotgun sequence 29,219
WBUR01000047.1 MAG: bacterium isolate SB21 contig_874, whole genome shotgun sequence 27,975
WBUR01000048.1 MAG: bacterium isolate SB21 contig_883, whole genome shotgun sequence 27,771
WBUR01000049.1 MAG: bacterium isolate SB21 contig_953, whole genome shotgun sequence 25,885
WBUR01000050.1 MAG: bacterium isolate SB21 contig_1051, whole genome shotgun sequence 23,726
WBUR01000051.1 MAG: bacterium isolate SB21 contig_1088, whole genome shotgun sequence 22,989
WBUR01000052.1 MAG: bacterium isolate SB21 contig_1225, whole genome shotgun sequence 20,156
WBUR01000053.1 MAG: bacterium isolate SB21 contig_1266, whole genome shotgun sequence 19,592
WBUR01000054.1 MAG: bacterium isolate SB21 contig_1385, whole genome shotgun sequence 18,063
WBUR01000055.1 MAG: bacterium isolate SB21 contig_1457, whole genome shotgun sequence 17,173
WBUR01000056.1 MAG: bacterium isolate SB21 contig_1464, whole genome shotgun sequence 17,123
WBUR01000057.1 MAG: bacterium isolate SB21 contig_1552, whole genome shotgun sequence 16,148
WBUR01000058.1 MAG: bacterium isolate SB21 contig_1574, whole genome shotgun sequence 15,895
WBUR01000059.1 MAG: bacterium isolate SB21 contig_1587, whole genome shotgun sequence 15,794
WBUR01000060.1 MAG: bacterium isolate SB21 contig_1870, whole genome shotgun sequence 13,581
WBUR01000061.1 MAG: bacterium isolate SB21 contig_2040, whole genome shotgun sequence 12,427
WBUR01000062.1 MAG: bacterium isolate SB21 contig_2094, whole genome shotgun sequence 12,122
WBUR01000063.1 MAG: bacterium isolate SB21 contig_2231, whole genome shotgun sequence 11,473
WBUR01000064.1 MAG: bacterium isolate SB21 contig_2421, whole genome shotgun sequence 10,588
WBUR01000065.1 MAG: bacterium isolate SB21 contig_2540, whole genome shotgun sequence 10,179
WBUR01000066.1 MAG: bacterium isolate SB21 contig_2775, whole genome shotgun sequence 9,388
WBUR01000067.1 MAG: bacterium isolate SB21 contig_2781, whole genome shotgun sequence 9,358
WBUR01000068.1 MAG: bacterium isolate SB21 contig_4283, whole genome shotgun sequence 6,573
WBUR01000069.1 MAG: bacterium isolate SB21 contig_4908, whole genome shotgun sequence 5,903
WBUR01000070.1 MAG: bacterium isolate SB21 contig_5449, whole genome shotgun sequence 5,446
WBUR01000071.1 MAG: bacterium isolate SB21 contig_5471, whole genome shotgun sequence 5,431
WBUR01000072.1 MAG: bacterium isolate SB21 contig_6303, whole genome shotgun sequence 4,863
WBUR01000073.1 MAG: bacterium isolate SB21 contig_6637, whole genome shotgun sequence 4,670
WBUR01000074.1 MAG: bacterium isolate SB21 contig_7016, whole genome shotgun sequence 4,464
WBUR01000075.1 MAG: bacterium isolate SB21 contig_7203, whole genome shotgun sequence 4,378
WBUR01000076.1 MAG: bacterium isolate SB21 contig_7430, whole genome shotgun sequence 4,277
WBUR01000077.1 MAG: bacterium isolate SB21 contig_7562, whole genome shotgun sequence 4,224
WBUR01000078.1 MAG: bacterium isolate SB21 contig_7947, whole genome shotgun sequence 4,068
WBUR01000079.1 MAG: bacterium isolate SB21 contig_8239, whole genome shotgun sequence 3,972
WBUR01000080.1 MAG: bacterium isolate SB21 contig_8468, whole genome shotgun sequence 3,896
WBUR01000081.1 MAG: bacterium isolate SB21 contig_9478, whole genome shotgun sequence 3,597
WBUR01000082.1 MAG: bacterium isolate SB21 contig_9589, whole genome shotgun sequence 3,571
WBUR01000083.1 MAG: bacterium isolate SB21 contig_9711, whole genome shotgun sequence 3,537
WBUR01000084.1 MAG: bacterium isolate SB21 contig_9787, whole genome shotgun sequence 3,521
WBUR01000085.1 MAG: bacterium isolate SB21 contig_10192, whole genome shotgun sequence 3,426
WBUR01000086.1 MAG: bacterium isolate SB21 contig_12025, whole genome shotgun sequence 3,065
WBUR01000087.1 MAG: bacterium isolate SB21 contig_12994, whole genome shotgun sequence 2,906
WBUR01000088.1 MAG: bacterium isolate SB21 contig_13948, whole genome shotgun sequence 2,771
WBUR01000089.1 MAG: bacterium isolate SB21 contig_17923, whole genome shotgun sequence 2,356
WBUR01000090.1 MAG: bacterium isolate SB21 contig_20802, whole genome shotgun sequence 2,135
WBUR01000091.1 MAG: bacterium isolate SB21 contig_21159, whole genome shotgun sequence 2,113
WBUR01000092.1 MAG: bacterium isolate SB21 contig_21257, whole genome shotgun sequence 2,107
WBUR01000093.1 MAG: bacterium isolate SB21 contig_22390, whole genome shotgun sequence 2,038
WBUR01000094.1 MAG: bacterium isolate SB21 contig_22807, whole genome shotgun sequence 2,015
WBUR01000095.1 MAG: bacterium isolate SB21 contig_23252, whole genome shotgun sequence 1,992
WBUR01000096.1 MAG: bacterium isolate SB21 contig_33321, whole genome shotgun sequence 1,597
WBUR01000097.1 MAG: bacterium isolate SB21 contig_35549, whole genome shotgun sequence 1,535

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory