fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACRCG01 sp009684515 H7geo

Genome identifier: GCA_009684515.1

NCBI assembly name: ASM968451v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Geobacterales, Pseudopelobacteraceae, JACRCG01, JACRCG01 sp009684515

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Geobacterales, Geobacteraceae, Geobacter

Scaffolds: 32

Genes: 3,337 Protein-coding: 3,247 RNAs: 54 pseudogenes: 36

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WKKS01000001.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_1, whole genome shotgun sequence 1,011,396
WKKS01000002.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_2, whole genome shotgun sequence 430,746
WKKS01000003.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_3, whole genome shotgun sequence 413,762
WKKS01000004.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_4, whole genome shotgun sequence 336,008
WKKS01000005.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_5, whole genome shotgun sequence 228,287
WKKS01000006.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_6, whole genome shotgun sequence 157,030
WKKS01000007.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_7, whole genome shotgun sequence 139,040
WKKS01000008.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_8, whole genome shotgun sequence 126,773
WKKS01000009.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_9, whole genome shotgun sequence 115,526
WKKS01000010.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_10, whole genome shotgun sequence 103,018
WKKS01000011.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_11, whole genome shotgun sequence 102,682
WKKS01000012.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_12, whole genome shotgun sequence 93,583
WKKS01000013.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_13, whole genome shotgun sequence 70,414
WKKS01000014.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_14, whole genome shotgun sequence 70,379
WKKS01000015.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_15, whole genome shotgun sequence 57,128
WKKS01000016.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_16, whole genome shotgun sequence 53,032
WKKS01000017.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_17, whole genome shotgun sequence 42,414
WKKS01000018.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_18, whole genome shotgun sequence 41,803
WKKS01000019.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_19, whole genome shotgun sequence 23,657
WKKS01000020.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_20, whole genome shotgun sequence 11,124
WKKS01000021.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_21, whole genome shotgun sequence 9,331
WKKS01000022.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_22, whole genome shotgun sequence 7,514
WKKS01000023.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_rRNA_contig_23, whole genome shotgun sequence 5,427
WKKS01000024.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_24, whole genome shotgun sequence 5,111
WKKS01000025.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_25, whole genome shotgun sequence 3,819
WKKS01000026.1 MAG: Geobacter sp. isolate H7geo H7geo_contig_26, whole genome shotgun sequence 3,599
WKKS01000027.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_27, whole genome shotgun sequence 1,968
WKKS01000028.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_28, whole genome shotgun sequence 1,646
WKKS01000029.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_29, whole genome shotgun sequence 1,425
WKKS01000030.1 MAG: Geobacter sp. isolate H7geo H7geo_five_copied_contig_30, whole genome shotgun sequence 1,318
WKKS01000031.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_31, whole genome shotgun sequence 1,272
WKKS01000032.1 MAG: Geobacter sp. isolate H7geo H7geo_doubled_contig_32, whole genome shotgun sequence 1,184

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory