fast.genomicscompare 6,575 genera of bacteria & archaea

 

SCSY01 sp009773185 X2_MetaBAT.7

Genome identifier: GCA_009773185.1

NCBI assembly name: ASM977318v1

GTDB taxonomy: Bacteria, Nitrospirota, Thermodesulfovibrionia, Thermodesulfovibrionales, UBA1546, SCSY01, SCSY01 sp009773185

NCBI taxonomy: Bacteria, Nitrospirota

Scaffolds: 44

Genes: 2,806 Protein-coding: 2,806 RNAs: 0 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WPIF01000001.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_25, whole genome shotgun sequence 179,066
WPIF01000002.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_30, whole genome shotgun sequence 162,275
WPIF01000003.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_32, whole genome shotgun sequence 145,553
WPIF01000004.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_38, whole genome shotgun sequence 136,638
WPIF01000005.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_53, whole genome shotgun sequence 136,484
WPIF01000006.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_56, whole genome shotgun sequence 167,259
WPIF01000007.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_63, whole genome shotgun sequence 112,205
WPIF01000008.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_74, whole genome shotgun sequence 143,234
WPIF01000009.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_79, whole genome shotgun sequence 99,306
WPIF01000010.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_91, whole genome shotgun sequence 91,852
WPIF01000011.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_99, whole genome shotgun sequence 141,776
WPIF01000012.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_101, whole genome shotgun sequence 84,929
WPIF01000013.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_113, whole genome shotgun sequence 79,478
WPIF01000014.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_125, whole genome shotgun sequence 73,699
WPIF01000015.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_128, whole genome shotgun sequence 72,451
WPIF01000016.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_161, whole genome shotgun sequence 61,138
WPIF01000017.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_164, whole genome shotgun sequence 60,745
WPIF01000018.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_176, whole genome shotgun sequence 57,726
WPIF01000019.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_197, whole genome shotgun sequence 53,158
WPIF01000020.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_202, whole genome shotgun sequence 51,567
WPIF01000021.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_221, whole genome shotgun sequence 49,630
WPIF01000022.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_227, whole genome shotgun sequence 57,194
WPIF01000023.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_253, whole genome shotgun sequence 44,631
WPIF01000024.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_279, whole genome shotgun sequence 40,929
WPIF01000025.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_293, whole genome shotgun sequence 38,272
WPIF01000026.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_333, whole genome shotgun sequence 37,887
WPIF01000027.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_335, whole genome shotgun sequence 34,494
WPIF01000028.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_352, whole genome shotgun sequence 33,460
WPIF01000029.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_357, whole genome shotgun sequence 32,646
WPIF01000030.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_365, whole genome shotgun sequence 31,721
WPIF01000031.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_388, whole genome shotgun sequence 30,050
WPIF01000032.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_414, whole genome shotgun sequence 75,196
WPIF01000033.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_426, whole genome shotgun sequence 26,665
WPIF01000034.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_505, whole genome shotgun sequence 23,032
WPIF01000035.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_507, whole genome shotgun sequence 22,927
WPIF01000036.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_542, whole genome shotgun sequence 21,433
WPIF01000037.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_654, whole genome shotgun sequence 18,191
WPIF01000038.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_658, whole genome shotgun sequence 22,954
WPIF01000039.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_1194, whole genome shotgun sequence 10,184
WPIF01000040.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_1559, whole genome shotgun sequence 7,877
WPIF01000041.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_1947, whole genome shotgun sequence 6,467
WPIF01000042.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_3709, whole genome shotgun sequence 4,069
WPIF01000043.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_4074, whole genome shotgun sequence 3,827
WPIF01000044.1 MAG: Nitrospirae bacterium isolate X2_MetaBAT.7 scaffold_6279, whole genome shotgun sequence 2,873

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory