fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA8904 sp009773315 X3_MaxBin.011

Genome identifier: GCA_009773315.1

NCBI assembly name: ASM977331v1

GTDB taxonomy: Bacteria, Desulfobacterota, Syntrophia, Syntrophales, Smithellaceae, UBA8904, UBA8904 sp009773315

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Syntrophia, Syntrophales, Syntrophaceae

Scaffolds: 86

Genes: 2,775 Protein-coding: 2,775 RNAs: 0 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WRPE01000001.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_63, whole genome shotgun sequence 128,272
WRPE01000002.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_108, whole genome shotgun sequence 107,013
WRPE01000003.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_115, whole genome shotgun sequence 134,035
WRPE01000004.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_150, whole genome shotgun sequence 93,260
WRPE01000005.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_163, whole genome shotgun sequence 90,766
WRPE01000006.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_171, whole genome shotgun sequence 147,987
WRPE01000007.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_230, whole genome shotgun sequence 147,572
WRPE01000008.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_235, whole genome shotgun sequence 75,219
WRPE01000009.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_298, whole genome shotgun sequence 67,321
WRPE01000010.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_319, whole genome shotgun sequence 77,944
WRPE01000011.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_326, whole genome shotgun sequence 66,257
WRPE01000012.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_350, whole genome shotgun sequence 61,638
WRPE01000013.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_351, whole genome shotgun sequence 61,413
WRPE01000014.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_357, whole genome shotgun sequence 60,979
WRPE01000015.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_365, whole genome shotgun sequence 60,464
WRPE01000016.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_374, whole genome shotgun sequence 59,195
WRPE01000017.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_379, whole genome shotgun sequence 58,826
WRPE01000018.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_409, whole genome shotgun sequence 55,563
WRPE01000019.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_482, whole genome shotgun sequence 49,355
WRPE01000020.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_487, whole genome shotgun sequence 49,071
WRPE01000021.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_498, whole genome shotgun sequence 48,552
WRPE01000022.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_520, whole genome shotgun sequence 79,345
WRPE01000023.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_577, whole genome shotgun sequence 44,278
WRPE01000024.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_578, whole genome shotgun sequence 44,259
WRPE01000025.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_597, whole genome shotgun sequence 43,095
WRPE01000026.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_635, whole genome shotgun sequence 61,117
WRPE01000027.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_681, whole genome shotgun sequence 39,279
WRPE01000028.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_700, whole genome shotgun sequence 38,483
WRPE01000029.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_713, whole genome shotgun sequence 37,952
WRPE01000030.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_742, whole genome shotgun sequence 37,020
WRPE01000031.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_743, whole genome shotgun sequence 54,052
WRPE01000032.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_745, whole genome shotgun sequence 36,820
WRPE01000033.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_820, whole genome shotgun sequence 34,486
WRPE01000034.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_836, whole genome shotgun sequence 34,054
WRPE01000035.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_852, whole genome shotgun sequence 33,435
WRPE01000036.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_926, whole genome shotgun sequence 31,404
WRPE01000037.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_939, whole genome shotgun sequence 31,136
WRPE01000038.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_951, whole genome shotgun sequence 30,505
WRPE01000039.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1029, whole genome shotgun sequence 28,550
WRPE01000040.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1066, whole genome shotgun sequence 27,175
WRPE01000041.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1131, whole genome shotgun sequence 25,602
WRPE01000042.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1134, whole genome shotgun sequence 33,780
WRPE01000043.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1142, whole genome shotgun sequence 25,314
WRPE01000044.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1218, whole genome shotgun sequence 23,586
WRPE01000045.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1259, whole genome shotgun sequence 22,733
WRPE01000046.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1261, whole genome shotgun sequence 22,713
WRPE01000047.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1343, whole genome shotgun sequence 21,626
WRPE01000048.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1421, whole genome shotgun sequence 20,036
WRPE01000049.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1514, whole genome shotgun sequence 18,410
WRPE01000050.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1520, whole genome shotgun sequence 18,374
WRPE01000051.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1581, whole genome shotgun sequence 17,446
WRPE01000052.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1688, whole genome shotgun sequence 16,117
WRPE01000053.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1822, whole genome shotgun sequence 15,375
WRPE01000054.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1830, whole genome shotgun sequence 14,550
WRPE01000055.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1912, whole genome shotgun sequence 13,867
WRPE01000056.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_1999, whole genome shotgun sequence 13,006
WRPE01000057.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2035, whole genome shotgun sequence 12,764
WRPE01000058.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2037, whole genome shotgun sequence 12,746
WRPE01000059.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2206, whole genome shotgun sequence 12,213
WRPE01000060.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2218, whole genome shotgun sequence 11,433
WRPE01000061.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2261, whole genome shotgun sequence 11,094
WRPE01000062.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2291, whole genome shotgun sequence 10,860
WRPE01000063.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2449, whole genome shotgun sequence 9,955
WRPE01000064.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2463, whole genome shotgun sequence 9,891
WRPE01000065.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2559, whole genome shotgun sequence 9,424
WRPE01000066.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2644, whole genome shotgun sequence 9,073
WRPE01000067.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_2964, whole genome shotgun sequence 7,921
WRPE01000068.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_3007, whole genome shotgun sequence 7,797
WRPE01000069.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_3782, whole genome shotgun sequence 12,782
WRPE01000070.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_3961, whole genome shotgun sequence 5,762
WRPE01000071.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_4074, whole genome shotgun sequence 5,569
WRPE01000072.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_4238, whole genome shotgun sequence 5,394
WRPE01000073.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_4883, whole genome shotgun sequence 4,717
WRPE01000074.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_5610, whole genome shotgun sequence 4,190
WRPE01000075.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_6730, whole genome shotgun sequence 3,596
WRPE01000076.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_7802, whole genome shotgun sequence 3,195
WRPE01000077.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_9034, whole genome shotgun sequence 2,865
WRPE01000078.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_10593, whole genome shotgun sequence 2,553
WRPE01000079.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_13996, whole genome shotgun sequence 2,107
WRPE01000080.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_14852, whole genome shotgun sequence 2,027
WRPE01000081.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_15578, whole genome shotgun sequence 1,962
WRPE01000082.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_17800, whole genome shotgun sequence 1,805
WRPE01000083.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_22051, whole genome shotgun sequence 1,586
WRPE01000084.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_36765, whole genome shotgun sequence 1,186
WRPE01000085.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_46764, whole genome shotgun sequence 1,037
WRPE01000086.1 MAG: Syntrophaceae bacterium isolate X3_MaxBin.011 scaffold_71874, whole genome shotgun sequence 1,095

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory