fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bin80 sp009838195 SB0664_bin_7

Genome identifier: GCA_009838195.1

NCBI assembly name: ASM983819v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Rhodothermales, Bin80, Bin80, Bin80 sp009838195

NCBI taxonomy: Bacteria, Rhodothermota, Rhodothermia, Rhodothermales, Rhodothermaceae

Scaffolds: 48

Genes: 2,358 Protein-coding: 2,289 RNAs: 48 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
VXSC01000001.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_4560_length_6663_cov_500.199607, whole genome shotgun sequence 6,663
VXSC01000002.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_100_length_151836_cov_553.690949, whole genome shotgun sequence 151,836
VXSC01000003.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_734_length_42093_cov_595.874019, whole genome shotgun sequence 42,093
VXSC01000004.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_4760_length_6387_cov_577.892767, whole genome shotgun sequence 6,387
VXSC01000005.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_927_length_33045_cov_531.529858, whole genome shotgun sequence 33,045
VXSC01000006.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_11111_length_3103_cov_474.366798, whole genome shotgun sequence 3,103
VXSC01000007.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_297_length_80855_cov_603.930891, whole genome shotgun sequence 80,855
VXSC01000008.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_96_length_156314_cov_534.356063, whole genome shotgun sequence 156,314
VXSC01000009.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_4848_length_6255_cov_505.015323, whole genome shotgun sequence 6,255
VXSC01000010.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1591_length_19605_cov_506.972174, whole genome shotgun sequence 19,605
VXSC01000011.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_42_length_210814_cov_577.755451, whole genome shotgun sequence 210,814
VXSC01000012.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_9834_length_3425_cov_495.379525, whole genome shotgun sequence 3,425
VXSC01000013.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2476_length_12408_cov_560.614669, whole genome shotgun sequence 12,408
VXSC01000014.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2134_length_14293_cov_493.688650, whole genome shotgun sequence 14,293
VXSC01000015.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2136_length_14282_cov_619.017853, whole genome shotgun sequence 14,282
VXSC01000016.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2335_length_13053_cov_530.778274, whole genome shotgun sequence 13,053
VXSC01000017.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2170_length_14083_cov_479.691046, whole genome shotgun sequence 14,083
VXSC01000018.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_24_length_274114_cov_586.959100, whole genome shotgun sequence 274,114
VXSC01000019.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_134_length_130779_cov_529.380856, whole genome shotgun sequence 130,779
VXSC01000020.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_348_length_72601_cov_552.211245, whole genome shotgun sequence 72,601
VXSC01000021.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_3376_length_8927_cov_483.742786, whole genome shotgun sequence 8,927
VXSC01000022.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_80_length_166922_cov_543.576974, whole genome shotgun sequence 166,922
VXSC01000023.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_2085_length_14682_cov_616.955425, whole genome shotgun sequence 14,682
VXSC01000024.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_4909_length_6177_cov_562.775237, whole genome shotgun sequence 6,177
VXSC01000025.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1285_length_24309_cov_530.843943, whole genome shotgun sequence 24,309
VXSC01000026.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_5833_length_5325_cov_481.457116, whole genome shotgun sequence 5,325
VXSC01000027.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_131_length_131581_cov_579.882822, whole genome shotgun sequence 131,581
VXSC01000028.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_9460_length_3530_cov_431.956547, whole genome shotgun sequence 3,530
VXSC01000029.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1070_length_28962_cov_492.614799, whole genome shotgun sequence 28,962
VXSC01000030.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_705_length_43222_cov_535.775662, whole genome shotgun sequence 43,222
VXSC01000031.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_226_length_94482_cov_521.831325, whole genome shotgun sequence 94,482
VXSC01000032.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_159_length_116059_cov_543.041240, whole genome shotgun sequence 116,059
VXSC01000033.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1927_length_16052_cov_495.332562, whole genome shotgun sequence 16,052
VXSC01000034.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1034_length_30019_cov_568.162295, whole genome shotgun sequence 30,019
VXSC01000035.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_5426_length_5648_cov_527.475058, whole genome shotgun sequence 5,648
VXSC01000036.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_36_length_228554_cov_553.584204, whole genome shotgun sequence 228,554
VXSC01000037.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_362_length_71262_cov_522.569972, whole genome shotgun sequence 71,262
VXSC01000038.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_429_length_63516_cov_524.647279, whole genome shotgun sequence 63,516
VXSC01000039.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_3026_length_10088_cov_526.916874, whole genome shotgun sequence 10,088
VXSC01000040.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1856_length_16634_cov_558.295736, whole genome shotgun sequence 16,634
VXSC01000041.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1141_length_27491_cov_544.161139, whole genome shotgun sequence 27,491
VXSC01000042.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_270_length_85646_cov_577.178909, whole genome shotgun sequence 85,646
VXSC01000043.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_8900_length_3723_cov_450.776718, whole genome shotgun sequence 3,723
VXSC01000044.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_91_length_159760_cov_577.089402, whole genome shotgun sequence 159,760
VXSC01000045.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1835_length_16808_cov_587.019101, whole genome shotgun sequence 16,808
VXSC01000046.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_4323_length_7011_cov_481.452559, whole genome shotgun sequence 7,011
VXSC01000047.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_16_length_331847_cov_575.268261, whole genome shotgun sequence 331,847
VXSC01000048.1 MAG: Rhodothermaceae bacterium isolate SB0664_bin_7 NODE_1568_length_19904_cov_578.418157, whole genome shotgun sequence 19,904

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory