fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA6145 sp009926935 WB4_1_1452

Genome identifier: GCA_009926935.1

NCBI assembly name: ASM992693v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micavibrionales, Micavibrionaceae, UBA6145, UBA6145 sp009926935

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 24

Genes: 2,014 Protein-coding: 1,956 RNAs: 44 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
RFNZ01000001.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_0, whole genome shotgun sequence 297,691
RFNZ01000002.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_1, whole genome shotgun sequence 231,608
RFNZ01000003.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_2, whole genome shotgun sequence 214,531
RFNZ01000004.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_3, whole genome shotgun sequence 188,401
RFNZ01000005.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_4, whole genome shotgun sequence 150,117
RFNZ01000006.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_5, whole genome shotgun sequence 124,475
RFNZ01000007.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_6, whole genome shotgun sequence 102,411
RFNZ01000008.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_7, whole genome shotgun sequence 97,768
RFNZ01000009.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_8, whole genome shotgun sequence 92,170
RFNZ01000010.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_9, whole genome shotgun sequence 63,775
RFNZ01000011.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_10, whole genome shotgun sequence 61,347
RFNZ01000012.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_11, whole genome shotgun sequence 60,831
RFNZ01000013.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_12, whole genome shotgun sequence 54,299
RFNZ01000014.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_13, whole genome shotgun sequence 51,076
RFNZ01000015.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_14, whole genome shotgun sequence 48,848
RFNZ01000016.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_15, whole genome shotgun sequence 48,614
RFNZ01000017.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_16, whole genome shotgun sequence 48,253
RFNZ01000018.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_17, whole genome shotgun sequence 28,660
RFNZ01000019.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_18, whole genome shotgun sequence 25,740
RFNZ01000020.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_19, whole genome shotgun sequence 20,234
RFNZ01000021.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_20, whole genome shotgun sequence 19,390
RFNZ01000022.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_21, whole genome shotgun sequence 4,694
RFNZ01000023.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_22, whole genome shotgun sequence 4,441
RFNZ01000024.1 MAG: Proteobacteria bacterium isolate WB4_1_1452 contig_100_23, whole genome shotgun sequence 4,325

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory