Genome identifier: GCA_012034405.1
NCBI assembly name: ASM1203440v1
GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Saccharofermentanales, Fastidiosipilaceae, JAAVLZ01, JAAVLZ01 sp012034405
NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae
Scaffolds: 72
Genes: 2,462 Protein-coding: 2,364 RNAs: 53 pseudogenes: 45
GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)
| scaffoldId | description | length |
|---|---|---|
| JAAVLZ010000001.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_1, whole genome shotgun sequence | 296,629 |
| JAAVLZ010000002.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_2, whole genome shotgun sequence | 223,914 |
| JAAVLZ010000003.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_3, whole genome shotgun sequence | 203,507 |
| JAAVLZ010000004.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_4, whole genome shotgun sequence | 186,559 |
| JAAVLZ010000005.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_5, whole genome shotgun sequence | 152,718 |
| JAAVLZ010000006.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_6, whole genome shotgun sequence | 140,234 |
| JAAVLZ010000007.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_7, whole genome shotgun sequence | 137,871 |
| JAAVLZ010000008.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_8, whole genome shotgun sequence | 134,989 |
| JAAVLZ010000009.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_9, whole genome shotgun sequence | 124,702 |
| JAAVLZ010000010.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_10, whole genome shotgun sequence | 117,329 |
| JAAVLZ010000011.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_11, whole genome shotgun sequence | 112,481 |
| JAAVLZ010000012.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_12, whole genome shotgun sequence | 98,420 |
| JAAVLZ010000013.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_13, whole genome shotgun sequence | 95,587 |
| JAAVLZ010000014.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_14, whole genome shotgun sequence | 84,196 |
| JAAVLZ010000015.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_15, whole genome shotgun sequence | 72,280 |
| JAAVLZ010000016.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_16, whole genome shotgun sequence | 67,486 |
| JAAVLZ010000017.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_17, whole genome shotgun sequence | 61,741 |
| JAAVLZ010000018.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_18, whole genome shotgun sequence | 58,726 |
| JAAVLZ010000019.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_19, whole genome shotgun sequence | 58,523 |
| JAAVLZ010000020.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_20, whole genome shotgun sequence | 56,354 |
| JAAVLZ010000021.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_21, whole genome shotgun sequence | 50,511 |
| JAAVLZ010000022.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_22, whole genome shotgun sequence | 48,099 |
| JAAVLZ010000023.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_23, whole genome shotgun sequence | 42,877 |
| JAAVLZ010000024.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_24, whole genome shotgun sequence | 34,911 |
| JAAVLZ010000025.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_25, whole genome shotgun sequence | 32,861 |
| JAAVLZ010000026.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_26, whole genome shotgun sequence | 21,498 |
| JAAVLZ010000027.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_27, whole genome shotgun sequence | 20,928 |
| JAAVLZ010000028.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_28, whole genome shotgun sequence | 20,123 |
| JAAVLZ010000029.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_29, whole genome shotgun sequence | 19,715 |
| JAAVLZ010000030.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_30, whole genome shotgun sequence | 17,343 |
| JAAVLZ010000031.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_31, whole genome shotgun sequence | 13,187 |
| JAAVLZ010000032.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_32, whole genome shotgun sequence | 10,200 |
| JAAVLZ010000033.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_33, whole genome shotgun sequence | 10,012 |
| JAAVLZ010000034.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_34, whole genome shotgun sequence | 5,877 |
| JAAVLZ010000035.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_35, whole genome shotgun sequence | 4,416 |
| JAAVLZ010000036.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_36, whole genome shotgun sequence | 3,246 |
| JAAVLZ010000037.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_37, whole genome shotgun sequence | 2,237 |
| JAAVLZ010000038.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_38, whole genome shotgun sequence | 1,773 |
| JAAVLZ010000039.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_39, whole genome shotgun sequence | 1,677 |
| JAAVLZ010000040.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_40, whole genome shotgun sequence | 1,629 |
| JAAVLZ010000041.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_41, whole genome shotgun sequence | 1,543 |
| JAAVLZ010000042.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_42, whole genome shotgun sequence | 1,237 |
| JAAVLZ010000043.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_43, whole genome shotgun sequence | 1,182 |
| JAAVLZ010000044.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_44, whole genome shotgun sequence | 1,077 |
| JAAVLZ010000045.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_45, whole genome shotgun sequence | 1,008 |
| JAAVLZ010000046.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_46, whole genome shotgun sequence | 970 |
| JAAVLZ010000047.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_47, whole genome shotgun sequence | 914 |
| JAAVLZ010000048.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_48, whole genome shotgun sequence | 902 |
| JAAVLZ010000049.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_49, whole genome shotgun sequence | 896 |
| JAAVLZ010000050.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_50, whole genome shotgun sequence | 845 |
| JAAVLZ010000051.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_51, whole genome shotgun sequence | 819 |
| JAAVLZ010000052.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_52, whole genome shotgun sequence | 712 |
| JAAVLZ010000053.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_53, whole genome shotgun sequence | 709 |
| JAAVLZ010000054.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_54, whole genome shotgun sequence | 645 |
| JAAVLZ010000055.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_55, whole genome shotgun sequence | 632 |
| JAAVLZ010000056.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_56, whole genome shotgun sequence | 629 |
| JAAVLZ010000057.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_57, whole genome shotgun sequence | 558 |
| JAAVLZ010000058.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_58, whole genome shotgun sequence | 418 |
| JAAVLZ010000059.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_59, whole genome shotgun sequence | 411 |
| JAAVLZ010000060.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_60, whole genome shotgun sequence | 374 |
| JAAVLZ010000061.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_61, whole genome shotgun sequence | 361 |
| JAAVLZ010000062.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_62, whole genome shotgun sequence | 356 |
| JAAVLZ010000063.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_63, whole genome shotgun sequence | 346 |
| JAAVLZ010000064.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_64, whole genome shotgun sequence | 339 |
| JAAVLZ010000065.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_65, whole genome shotgun sequence | 338 |
| JAAVLZ010000066.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_66, whole genome shotgun sequence | 337 |
| JAAVLZ010000067.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_67, whole genome shotgun sequence | 337 |
| JAAVLZ010000068.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_68, whole genome shotgun sequence | 334 |
| JAAVLZ010000069.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_69, whole genome shotgun sequence | 325 |
| JAAVLZ010000070.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_70, whole genome shotgun sequence | 318 |
| JAAVLZ010000071.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_71, whole genome shotgun sequence | 315 |
| JAAVLZ010000072.1 | Oscillospiraceae bacterium HV4-5-C5C HV4-5-C5C_S3_Assembly_contig_72, whole genome shotgun sequence | 301 |