fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA7359 sp013112535 PRO17

Genome identifier: GCA_013112535.1

NCBI assembly name: ASM1311253v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, UBA4486, UBA4486, UBA7359, UBA7359 sp013112535

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 20

Genes: 2,981 Protein-coding: 2,914 RNAs: 45 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABFGI010000001.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000001, whole genome shotgun sequence 674,362
JABFGI010000002.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000002, whole genome shotgun sequence 666,113
JABFGI010000003.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000003, whole genome shotgun sequence 282,761
JABFGI010000004.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000004, whole genome shotgun sequence 217,454
JABFGI010000005.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000005, whole genome shotgun sequence 184,602
JABFGI010000006.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000006, whole genome shotgun sequence 181,292
JABFGI010000007.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000007, whole genome shotgun sequence 170,361
JABFGI010000008.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000008, whole genome shotgun sequence 149,432
JABFGI010000009.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000009, whole genome shotgun sequence 111,654
JABFGI010000010.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000010, whole genome shotgun sequence 89,114
JABFGI010000011.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000011, whole genome shotgun sequence 73,594
JABFGI010000012.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000012, whole genome shotgun sequence 59,666
JABFGI010000013.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000013, whole genome shotgun sequence 45,492
JABFGI010000014.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000014, whole genome shotgun sequence 44,546
JABFGI010000015.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000015, whole genome shotgun sequence 40,937
JABFGI010000016.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000016, whole genome shotgun sequence 31,953
JABFGI010000017.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000017, whole genome shotgun sequence 23,661
JABFGI010000018.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000018, whole genome shotgun sequence 1,291
JABFGI010000019.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000019, whole genome shotgun sequence 1,219
JABFGI010000020.1 MAG: Proteobacteria bacterium isolate PRO17 c_000000000020, whole genome shotgun sequence 1,050

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory