fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABFGF01 sp013112635 CLD14

Genome identifier: GCA_013112635.1

NCBI assembly name: ASM1311263v1

GTDB taxonomy: Bacteria, Calditrichota, Calditrichia, Calditrichales, J004, JABFGF01, JABFGF01 sp013112635

NCBI taxonomy: Bacteria, Calditrichota

Scaffolds: 29

Genes: 4,478 Protein-coding: 4,418 RNAs: 42 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABFGF010000001.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000001, whole genome shotgun sequence 1,288,351
JABFGF010000002.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000002, whole genome shotgun sequence 969,606
JABFGF010000003.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000003, whole genome shotgun sequence 589,051
JABFGF010000004.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000004, whole genome shotgun sequence 474,715
JABFGF010000005.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000005, whole genome shotgun sequence 399,058
JABFGF010000006.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000006, whole genome shotgun sequence 314,154
JABFGF010000007.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000007, whole genome shotgun sequence 255,307
JABFGF010000008.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000008, whole genome shotgun sequence 152,690
JABFGF010000009.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000009, whole genome shotgun sequence 141,231
JABFGF010000010.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000010, whole genome shotgun sequence 120,967
JABFGF010000011.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000011, whole genome shotgun sequence 100,090
JABFGF010000012.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000012, whole genome shotgun sequence 97,590
JABFGF010000013.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000013, whole genome shotgun sequence 89,567
JABFGF010000014.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000014, whole genome shotgun sequence 86,157
JABFGF010000015.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000015, whole genome shotgun sequence 74,724
JABFGF010000016.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000016, whole genome shotgun sequence 50,905
JABFGF010000017.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000017, whole genome shotgun sequence 36,609
JABFGF010000018.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000018, whole genome shotgun sequence 31,605
JABFGF010000019.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000019, whole genome shotgun sequence 14,331
JABFGF010000020.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000020, whole genome shotgun sequence 12,436
JABFGF010000021.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000021, whole genome shotgun sequence 10,773
JABFGF010000022.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000022, whole genome shotgun sequence 3,938
JABFGF010000023.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000023, whole genome shotgun sequence 2,469
JABFGF010000024.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000024, whole genome shotgun sequence 2,180
JABFGF010000025.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000025, whole genome shotgun sequence 1,735
JABFGF010000026.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000026, whole genome shotgun sequence 1,606
JABFGF010000027.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000027, whole genome shotgun sequence 1,572
JABFGF010000028.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000028, whole genome shotgun sequence 1,384
JABFGF010000029.1 MAG: Calditrichaeota bacterium isolate CLD14 c_000000000029, whole genome shotgun sequence 1,120

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory